| Protein: | ERV1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 189 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERV1.
| Description | E-value | Query Range |
Subject Range |
|
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229.0 | [0..8] | [189..57] |
|
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221.0 | [0..8] | [189..57] |
|
|
215.0 | [0..12] | [189..166] |
|
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212.0 | [0..28] | [189..62] |
|
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208.0 | [0..21] | [182..14] |
|
|
206.0 | [0..12] | [189..3] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MKAIDKMTDN PPQEGLSGRK IIYDEDGKPC RSCNTLLDFQ YVTGKISNGL KNLSSNGKLA 60
61 GTGALTGEAS EL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.497 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.460 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.460 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.431 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.348 | N/A | N/A | d.348.1 | Description not found. |
| View | Download | 0.342 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.339 | N/A | N/A | d.76.1 | GYF domain |
| View | Download | 0.289 | N/A | N/A | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.249 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.238 | N/A | N/A | g.41.10 | Zn-finger domain of Sec23/24 |
|
Region A: Residues: [73-189] |
1 11 21 31 41 51
| | | | | |
1 MPGSRTYRKV DPPDVEQLGR SSWTLLHSVA ASYPAQPTDQ QKGEMKQFLN IFSHIYPCNW 60
61 CAKDFEKYIR ENAPQVESRE ELGRWMCEAH NKVNKKLRKP KFDCNFWEKR WKDGWDE
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| Detection Method: | |
| Confidence: | 45.39794 |
| Match: | 1oqcA |
| Description: | Augmenter of liver regeneration |
Matching Structure (courtesy of the PDB): |
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