| Protein: | SNU71 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 620 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNU71.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-65 | [1..617] | [832..1424] |
|
|
4.0E-64 | [1..617] | [835..1427] |
|
|
9.0E-64 | [1..617] | [46..638] |
|
|
1.0E-63 | [1..617] | [837..1429] |
|
|
1.0E-63 | [1..617] | [830..1422] |
|
Region A: Residues: [1-383] |
1 11 21 31 41 51
| | | | | |
1 MRDIVFVSPQ LYLSSQEGWK SDSAKSGFIP ILKNDLQRFQ DSLKHIVDAR NSLSETLLNS 60
61 NDDGSIHNSD QNTGLNKDKE ASIADNNSAN KCATSSSRYQ ELKQFLPISL DQQIHTVSLQ 120
121 GVSSSFSRGQ IESLLDHCLN LALTETQSNS ALKVEAWSSF SSFLDTQDIF IRFSKVDEDE 180
181 AFVNTLNYCK ALFAFIRKLH EDFKIELHLD LNTKEYVEDR TGTIPSVKPE KASEFYSVFK 240
241 NIEDQTDERN SKKEQLDDSS TQYKVDTNTL SDLPSDALDQ LCKDIIEFRT KVVSIEKEKK 300
301 MKSTYEESRR QRHQMQKVFD QIRKNHSGAK GSANTEEEDT NMEDEDEEDD TEDDLALEKR 360
361 KEERDLEESN RRYEDMLHQL HSN
|
| Detection Method: |  |
| Confidence: | 20.154902 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [384-620] |
1 11 21 31 41 51
| | | | | |
1 TEPKIKSIRA DIMSAENYEE HLEKNRSLYL KELLHLANDV HYDHHRSFKE QEERRDEEDR 60
61 AKNGNAKELA PIQLSDGKAI SAGKAAAITL PEGTVKSENY NADKNVSESS EHVKIKFDFK 120
121 KAIDHSVESS SEDEGYRESE LPPTKPSERS AAEDRLPFTA DELNIRLTNL KESRYVDELV 180
181 REFLGVYEDE LVEYILENIR VNQSKQALLN ELRETFDEDG ETIADRLWSR KEFRLGT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [521-620] |
1 11 21 31 41 51
| | | | | |
1 ESELPPTKPS ERSAAEDRLP FTADELNIRL TNLKESRYVD ELVREFLGVY EDELVEYILE 60
61 NIRVNQSKQA LLNELRETFD EDGETIADRL WSRKEFRLGT
|
| Detection Method: | |
| Confidence: | 3.15 |
| Match: | 1mp1A |
| Description: | Solution structure of the PWI motif from SRm160 |
Matching Structure (courtesy of the PDB): |
|
