Protein: | SNU71 |
Organism: | Saccharomyces cerevisiae |
Length: | 620 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNU71.
Description | E-value | Query Range |
Subject Range |
|
2.0E-65 | [1..617] | [832..1424] |
|
4.0E-64 | [1..617] | [835..1427] |
|
9.0E-64 | [1..617] | [46..638] |
|
1.0E-63 | [1..617] | [837..1429] |
|
1.0E-63 | [1..617] | [830..1422] |
Region A: Residues: [1-383] |
1 11 21 31 41 51 | | | | | | 1 MRDIVFVSPQ LYLSSQEGWK SDSAKSGFIP ILKNDLQRFQ DSLKHIVDAR NSLSETLLNS 60 61 NDDGSIHNSD QNTGLNKDKE ASIADNNSAN KCATSSSRYQ ELKQFLPISL DQQIHTVSLQ 120 121 GVSSSFSRGQ IESLLDHCLN LALTETQSNS ALKVEAWSSF SSFLDTQDIF IRFSKVDEDE 180 181 AFVNTLNYCK ALFAFIRKLH EDFKIELHLD LNTKEYVEDR TGTIPSVKPE KASEFYSVFK 240 241 NIEDQTDERN SKKEQLDDSS TQYKVDTNTL SDLPSDALDQ LCKDIIEFRT KVVSIEKEKK 300 301 MKSTYEESRR QRHQMQKVFD QIRKNHSGAK GSANTEEEDT NMEDEDEEDD TEDDLALEKR 360 361 KEERDLEESN RRYEDMLHQL HSN |
Detection Method: | |
Confidence: | 20.154902 |
Match: | 1i84S_ |
Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [384-620] |
1 11 21 31 41 51 | | | | | | 1 TEPKIKSIRA DIMSAENYEE HLEKNRSLYL KELLHLANDV HYDHHRSFKE QEERRDEEDR 60 61 AKNGNAKELA PIQLSDGKAI SAGKAAAITL PEGTVKSENY NADKNVSESS EHVKIKFDFK 120 121 KAIDHSVESS SEDEGYRESE LPPTKPSERS AAEDRLPFTA DELNIRLTNL KESRYVDELV 180 181 REFLGVYEDE LVEYILENIR VNQSKQALLN ELRETFDEDG ETIADRLWSR KEFRLGT |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [521-620] |
1 11 21 31 41 51 | | | | | | 1 ESELPPTKPS ERSAAEDRLP FTADELNIRL TNLKESRYVD ELVREFLGVY EDELVEYILE 60 61 NIRVNQSKQA LLNELRETFD EDGETIADRL WSRKEFRLGT |
Detection Method: | |
Confidence: | 3.15 |
Match: | 1mp1A |
Description: | Solution structure of the PWI motif from SRm160 |
Matching Structure (courtesy of the PDB): |