| Protein: | VID30 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 958 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VID30.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..958] | [1..958] |
|
|
2.0E-65 | [440..654] | [105..329] |
|
|
2.0E-65 | [440..654] | [180..404] |
|
|
2.0E-64 | [440..654] | [35..256] |
|
|
2.0E-63 | [441..669] | [45..279] |
|
|
8.0E-60 | [427..641] | [1019..1260] |
|
Region A: Residues: [1-47] |
1 11 21 31 41 51
| | | | | |
1 MSEYMDDVDR EFINCLFPSY LLQQPVAYDL WILYLQHRKL FHKLKNT
|
|
Region B: Residues: [270-349] |
1 11 21 31 41 51
| | | | | |
1 QYYPPDQSPS SSFSSPRVSS GNDKNDNEAT NVLSNSGSKK KNSMIPDIYK ILGYFLPSRW 60
61 QAQPNNSLQL SQDGITHLQP
|
| Detection Method: |  |
| Confidence: | 10.3 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [48-120] |
1 11 21 31 41 51
| | | | | |
1 NLINADENPT GVGMGRTKLT ALTRKEIWSK LMNLGVLGTI SFEAVNDDYL IQVYKYFYPD 60
61 VNDFTLRFGV KDS
|
| Detection Method: | |
| Confidence: | 10.3 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [121-199] |
1 11 21 31 41 51
| | | | | |
1 NKNSVRVMKA SSDMRKNAQE LLEPVLSERE MALNSNTSLE NDRNDDDDDD DDDDDDDDDD 60
61 DDDDDESDLE SLEGEVDTD
|
| Detection Method: | |
| Confidence: | 10.3 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [200-269] |
1 11 21 31 41 51
| | | | | |
1 TDDNNEGDGS DNHEEGGEEG SRGADADVSS AQQRAERVAD PWIYQRSRSA INIETESRNL 60
61 WDTSDKNSGL
|
| Detection Method: | |
| Confidence: | 10.3 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [350-420] |
1 11 21 31 41 51
| | | | | |
1 NPDYHSYMTY ERSSASSAST RNRLRTSFEN SGKVDFAVTW ANKSLPDNKL TIFYYEIKVL 60
61 SVTSTESAEN S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.886 | 0.037 | regulation of nitrogen utilization | g.41.3 | Zinc beta-ribbon |
|
Region A: Residues: [421-672] |
1 11 21 31 41 51
| | | | | |
1 NIVIGYKLVE NELMEATTKK SVSRSSVAGS SSSLGGSNNM SSNRVPSTSF TMEGTQRRDY 60
61 IYEGGVSAMS LNVDGSINKC QKYGFDLNVF GYCGFDGLIT NSTEQSKEYA KPFGRDDVIG 120
121 CGINFIDGSI FFTKNGIHLG NAFTDLNDLE FVPYVALRPG NSIKTNFGLN EDFVFDIIGY 180
181 QDKWKSLAYE HICRGRQMDV SIEEFDSDES EEDETENGPE ENKSTNVNED LMDIDQEDGA 240
241 AGNKDTKKLN DE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [673-958] |
1 11 21 31 41 51
| | | | | |
1 KDNNLKFLLG EDNRFIDGKL VRPDVNNINN LSVDDGSLPN TLNVMINDYL IHEGLVDVAK 60
61 GFLKDLQKDA VNVNGQHSES KDVIRHNERQ IMKEERMVKI RQELRYLINK GQISKCINYI 120
121 DNEIPDLLKN NLELVFELKL ANYLVMIKKS SSKDDDEIEN LILKGQELSN EFIYDTKIPQ 180
181 SLRDRFSGQL SNVSALLAYS NPLVEAPKEI SGYLSDEYLQ ERLFQVSNNT ILTFLHKDSE 240
241 CALENVISNT RAMLSTLLEY NAFGSTNSSD PRYYKAINFD EDVLNL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
