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View Structure Prediction Details

Protein: MTC3
Organism: Saccharomyces cerevisiae
Length: 123 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTC3.

Description E-value Query
Range		 Subject
Range
MTC3 - Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitocho...
MTC3_YEAST - Maintenance of telomere capping protein 3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 20...
 3.0E-50 [1..123] [1..123]
COX5_NEUCR - Cytochrome c oxidase polypeptide 5, mitochondrial OS=Neurospora crassa GN=cya-4 PE=3 SV=2
COX5_NEUCR - Cytochrome c oxidase polypeptide 5, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-...
 7.0E-33 [12..100] [25..117]
gi|7161891 - gi|7161891|emb|CAB76570.1| cytochrome c oxidase subunit V [Podospora anserina]
 6.0E-31 [11..100] [21..114]
COX5_ASPNG - Cytochrome c oxidase polypeptide 5, mitochondrial OS=Aspergillus niger GN=cox5 PE=3 SV=1
 2.0E-30 [12..99] [50..141]
COX5_SCHPO - Cytochrome c oxidase polypeptide 5, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...
cox5 - cytochrome c oxidase subunit V
 4.0E-25 [20..100] [31..114]

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Predicted Domain #1
Region A:
Residues: [1-123] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGRNGIRLA LKRSFSTYQP PVVEITNITK LWPTLRPEVR DEIKEYLRWR MQEDWRHIPL  60
   61 EETKAAYFLS YGPCGGRSKG NEWNVGYTGM RIVFNLVLFG GAATAFYNWK QDKKLEEQLR 120
  121 DLV

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.96
Match: 1occD
Description: Mitochondrial cytochrome c oxidase subunit IV
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrogen ion transmembrane transporter activity 0.200883452155884 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.161136760124421 bayes_pls_golite062009
binding 0.118712393901925 bayes_pls_golite062009
oxidoreductase activity 0.105855344322413 bayes_pls_golite062009
cytochrome-c oxidase activity 0.104705673375264 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors 0.104705673375264 bayes_pls_golite062009
oxidoreductase activity, acting on heme group of donors, oxygen as acceptor 0.104705673375264 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle