| Protein: | VRG4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 337 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VRG4.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-42 | [1..331] | [1..333] |
|
|
2.0E-39 | [3..335] | [90..410] |
|
|
5.0E-39 | [20..329] | [17..337] |
|
|
2.0E-38 | [5..333] | [3..334] |
|
|
6.0E-38 | [7..337] | [78..402] |
|
|
1.0E-37 | [3..337] | [77..405] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MSELKTGHAG HNPWASVANS GPISILSYCG SSILMTVTNK FVVNLKDFNM NFVMLFVQSL 60
61 VCTITLIILR ILGYAKFRSL
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [81-337] |
1 11 21 31 41 51
| | | | | |
1 NKTDAKNWFP ISFLLVLMIY TSSKALQYLA VPIYTIFKNL TIILIAYGEV LFFGGSVTSM 60
61 ELSSFLLMVL SSVVATWGDQ QAVAAKAASL AEGAAGAVAS FNPGYFWMFT NCITSALFVL 120
121 IMRKRIKLTN FKDFDTMFYN NVLALPILLL FSFCVEDWSS VNLTNNFSND SLTAMIISGV 180
181 ASVGISYCSG WCVRVTSSTT YSMVGALNKL PIALSGLIFF DAPRNFLSIL SIFIGFLSGI 240
241 IYAVAKQKKQ QAQPLRK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
