| Protein: | CDC55 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 526 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC55.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [3..525] | [967..1480] |
|
|
0.0 | [17..525] | [833..1247] |
|
|
0.0 | [1..526] | [1..526] |
|
Region A: Residues: [1-419] |
1 11 21 31 41 51
| | | | | |
1 MAQNNFDFKF SQCFGDKADI VVTEADLITA VEFDYTGNYL ATGDKGGRVV LFERSNSRHC 60
61 EYKFLTEFQS HDAEFDYLKS LEIEEKINEI KWLRPTQRSH FLLSTNDKTI KLWKVYEKNI 120
121 KLVSQNNLTE GVTFAKKGKP DNHNSRGGSV RAVLSLQSLK LPQLSQHDKI IAATPKRIYS 180
181 NAHTYHINSI SLNSDQETFL SADDLRINLW NLDIPDQSFN IVDIKPTNME ELTEVITSAE 240
241 FHPQECNLFM YSSSKGTIKL CDMRQNSLCD NKTKTFEEYL DPINHNFFTE ITSSISDIKF 300
301 SPNGRYIASR DYLTVKIWDV NMDNKPLKTI NIHEQLKERL SDTYENDAIF DKFEVNFSGD 360
361 SSSVMTGSYN NNFMIYPNVV TSGDNDNGIV KTFDEHNAPN SNSNKNIHNS IQNKDSSSS
|
| Detection Method: |  |
| Confidence: | 64.0 |
| Match: | 1b9xA_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [420-526] |
1 11 21 31 41 51
| | | | | |
1 GNSHKRRSNG RNTGMVGSSN SSRSSIAGGE GANSEDSGTE MNEIVLQADK TAFRNKRYGS 60
61 LAQRSARNKD WGDDIDFKKN ILHFSWHPRE NSIAVAATNN LFIFSAL
|
| Detection Method: | |
| Confidence: | 24.0 |
| Match: | 1gxrA_ |
| Description: | Groucho/tle1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
