| Protein: | GTS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 396 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GTS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..396] | [1..396] |
|
|
5.0E-53 | [10..261] | [2..244] |
|
|
1.0E-52 | [10..261] | [2..244] |
|
|
2.0E-51 | [10..261] | [2..244] |
|
|
1.0E-45 | [10..287] | [2..280] |
|
|
3.0E-44 | [14..249] | [7..212] |
|
Region A: Residues: [1-173] |
1 11 21 31 41 51
| | | | | |
1 MRFRSSSHSL KHVDRELKEL INSSENANKC GECGNFYPTW CSVNLGVFLC GRCASVHRKV 60
61 FGSRDDDAFS NVKSLSMDRW TREDIDELVS LGGNKGNARF WNPKNVPFPF DGDDDKAIVE 120
121 HYIRDKYILG KFRYDEIKPE DFGSRMDDFD GESDRFDERN RSRSRSRSHS FYK
|
| Detection Method: |  |
| Confidence: | 90.9794 |
| Match: | 1dcqA_ |
| Description: | Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [174-249] |
1 11 21 31 41 51
| | | | | |
1 GGHNRSDYGG SRDSFQSSGS RYSRQLAELK DMGFGDTNKN LDALSSAHGN INRAIDYLEK 60
61 SSSSRNSVSA AATTST
|
| Detection Method: | |
| Confidence: | 5.29243 |
| Match: | PF00627 |
| Description: | UBA/TS-N domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [250-396] |
1 11 21 31 41 51
| | | | | |
1 PPLPRRRATT SGPQPAIFDG TNVITPDFTS NSASFVQAKP AVFDGTLQQY YDPATGMIYV 60
61 DQQQYAMAMQ QQQQQQQQLA VAQAQAQAQA QAQAQVQAQA QAQAQAQAQA QQIQMQQLQM 120
121 QQQQQAPLSF QQMSQGGNLP QGYFYTQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.563 | a.25.1 | Ferritin-like |
| View | Download | 0.701 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.701 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.573 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.563 | a.25.1 | Ferritin-like |
| View | Download | 0.538 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.538 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.430 | a.25.1 | Ferritin-like |
| View | Download | 0.418 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.383 | a.63.1 | Apolipophorin-III |
| View | Download | 0.380 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.369 | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.343 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.329 | a.25.1 | Ferritin-like |
| View | Download | 0.326 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.316 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.311 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.307 | a.47.2 | t-snare proteins |
| View | Download | 0.307 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.299 | a.25.1 | Ferritin-like |
| View | Download | 0.291 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.287 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.281 | d.173.1 | Methionine synthase activation domain-like |
| View | Download | 0.272 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.265 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.262 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.261 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.258 | c.14.1 | ClpP/crotonase |
| View | Download | 0.254 | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.249 | a.7.1 | Spectrin repeat |
| View | Download | 0.246 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.245 | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.243 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.242 | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.241 | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.240 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.240 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.228 | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.224 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.223 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.223 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.215 | a.24.9 | alpha-catenin/vinculin |
