| Protein: | AIM14 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 570 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM14.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [40..568] | [371..962] |
|
|
0.0 | [40..568] | [372..963] |
|
|
0.0 | [43..568] | [339..938] |
|
|
0.0 | [40..568] | [360..944] |
|
|
0.0 | [40..568] | [360..944] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MKESPLITLV KRHSETHFAN IKYGYYVLII SLVYLIGLAL LRAFGRRTPS RSSSAFKNKI 60
61 IYRLYDIDPA IHLGILFFAV LIPFYYHYSL TTQSTVYLKR LGRLSYALIP LNLFLTLRPN 120
121 WFLRKNCTYT DFIPFHKWFS RIITVIGLLH GIFFIIKWAI DDNVSLKQKL ILKTF
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [176-227] |
1 11 21 31 41 51
| | | | | |
1 NFAGFIISIL VLFLLICSIG PMRRYNYRLF YIVHNLVNVA FILLTPIHSR PG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.373 | a.4.1 | Homeodomain-like |
| View | Download | 0.385 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.564 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.637 | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.370 | a.4.1 | Homeodomain-like |
| View | Download | 0.334 | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.327 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.323 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.316 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.316 | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.302 | a.4.1 | Homeodomain-like |
| View | Download | 0.281 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.279 | a.4.1 | Homeodomain-like |
| View | Download | 0.266 | a.4.1 | Homeodomain-like |
| View | Download | 0.257 | a.17.1 | p8-MTCP1 |
| View | Download | 0.254 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.246 | a.4.1 | Homeodomain-like |
| View | Download | 0.243 | a.5.2 | UBA-like |
| View | Download | 0.237 | a.118.8 | TPR-like |
| View | Download | 0.228 | a.4.1 | Homeodomain-like |
| View | Download | 0.222 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.222 | a.4.10 | N-terminal Zn binding domain of HIV integrase |
| View | Download | 0.211 | a.3.1 | Cytochrome c |
| View | Download | 0.211 | a.135.1 | Tetraspanin |
| View | Download | 0.209 | a.2.7 | tRNA-binding arm |
| Term | Confidence | Notes |
| transporter activity | 0.629864849462794 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.622501423809131 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.61858000771821 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.614636573821539 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.569065361315241 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.557390564903452 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.438985705028009 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.438562910643884 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.432885404990755 | bayes_pls_golite062009 |
| catalytic activity | 0.349353660965659 | bayes_pls_golite062009 |
| binding | 0.0102629993652836 | bayes_pls_golite062009 |
|
Region A: Residues: [228-359] |
1 11 21 31 41 51
| | | | | |
1 VKFPFLLLNC TLLFIHIINR IVFAKSLMIL NKNANYSKTN LVHVRLPRAI LPDYFEPGSH 60
61 IRISPYRRIN PLYWLLPSHP YTIASLAEDN SIDLIIKETS TAEPGSQIES LRSNPKSFHL 120
121 DQEKTYTLIN SY
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1cnf__ |
| Description: | Nitrate reductase core domain; Nitrate reductase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.687312782648907 | bayes_pls_golite062009 |
|
Region A: Residues: [360-570] |
1 11 21 31 41 51
| | | | | |
1 PPSVPEECYS QGTNIAIICG GSGISFALPL FRHFFNKENV KYLKMIWLIK DYSEYELVLD 60
61 YLKTNGLTFE KKLSNNKRIS VFISGEYTAE TRLDEITTNI DDENSEYEMG SFNNEDEDLS 120
121 ISNFNSENAD SNDNTPETSH SPTKENGSMI EVKSKHSFTL SNELKSFNNE SAQVNQNETW 180
181 LFSCGPPSLL QLSKKYCNDE RINFVCETYG L
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1cnf__ |
| Description: | Nitrate reductase core domain; Nitrate reductase |
| Matching Structure (courtesy of the PDB): |
|
