Protein: | PYC1 |
Organism: | Saccharomyces cerevisiae |
Length: | 1178 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PYC1.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [10..1165] | [13..1170] |
|
0.0 | [19..1168] | [2..1126] |
|
0.0 | [10..1168] | [14..1173] |
|
0.0 | [17..1169] | [35..1178] |
|
0.0 | [15..1170] | [3..1149] |
|
0.0 | [17..1169] | [35..1178] |
|
0.0 | [16..1168] | [1..1143] |
|
0.0 | [18..1170] | [38..1180] |
|
0.0 | [16..1169] | [1..1146] |
|
0.0 | [17..1170] | [6..1158] |
Region A: Residues: [1-128] |
1 11 21 31 41 51 | | | | | | 1 MSQRKFAGLR DNFNLLGEKN KILVANRGEI PIRIFRTAHE LSMQTVAIYS HEDRLSTHKQ 60 61 KADEAYVIGE VGQYTPVGAY LAIDEIISIA QKHQVDFIHP GYGFLSENSE FADKVVKAGI 120 121 TWIGPPAE |
Detection Method: | ![]() |
Confidence: | 1115.218487 |
Match: | 1lsrA_ |
Description: | No description for 1lsrA_ was found. |
Region A: Residues: [129-135] |
1 11 21 31 41 51 | | | | | | 1 VIDSVGD |
Region B: Residues: [151-223] |
1 11 21 31 41 51 | | | | | | 1 VPGTPGPIET VEEALDFVNE YGYPVIIKAA FGGGGRGMRV VREGDDVADA FQRATSEART 60 61 AFGNGTCFVE RFL |
Detection Method: | ![]() |
Confidence: | 1115.218487 |
Match: | 1lsrA_ |
Description: | No description for 1lsrA_ was found. |
Region A: Residues: [136-150] |
1 11 21 31 41 51 | | | | | | 1 KVSARNLAAK ANVPT |
Region B: Residues: [224-249] |
1 11 21 31 41 51 | | | | | | 1 DKPKHIEVQL LADNHGNVVH LFERDC |
Region C: Residues: [262-356] |
1 11 21 31 41 51 | | | | | | 1 APAKTLPREV RDAILTDAVK LAKECGYRNA GTAEFLVDNQ NRHYFIEINP RIQVEHTITE 60 61 EITGIDIVAA QIQIAAGASL PQLGLFQDKI TTRGF |
Detection Method: | ![]() |
Confidence: | 1115.218487 |
Match: | 1lsrA_ |
Description: | No description for 1lsrA_ was found. |
Region A: Residues: [250-261] |
1 11 21 31 41 51 | | | | | | 1 SVQRRHQKVV EV |
Region B: Residues: [357-508] |
1 11 21 31 41 51 | | | | | | 1 AIQCRITTED PAKNFQPDTG RIEVYRSAGG NGVRLDGGNA YAGTIISPHY DSMLVKCSCS 60 61 GSTYEIVRRK MIRALIEFRI RGVKTNIPFL LTLLTNPVFI EGTYWTTFID DTPQLFQMVS 120 121 SQNRAQKLLH YLADVAVNGS SIKGQIGLPK LK |
Detection Method: | ![]() |
Confidence: | 1115.218487 |
Match: | 1lsrA_ |
Description: | No description for 1lsrA_ was found. |
Region A: Residues: [509-893] |
1 11 21 31 41 51 | | | | | | 1 SNPSVPHLHD AQGNVINVTK SAPPSGWRQV LLEKGPAEFA RQVRQFNGTL LMDTTWRDAH 60 61 QSLLATRVRT HDLATIAPTT AHALAGRFAL ECWGGATFDV AMRFLHEDPW ERLRKLRSLV 120 121 PNIPFQMLLR GANGVAYSSL PDNAIDHFVK QAKDNGVDIF RVFDALNDLE QLKVGVDAVK 180 181 KAGGVVEATV CFSGDMLQPG KKYNLDYYLE IAEKIVQMGT HILGIKDMAG TMKPAAAKLL 240 241 IGSLRAKYPD LPIHVHTHDS AGTAVASMTA CALAGADVVD VAINSMSGLT SQPSINALLA 300 301 SLEGNIDTGI NVEHVRELDA YWAEMRLLYS CFEADLKGPD PEVYQHEIPG GQLTNLLFQA 360 361 QQLGLGEQWA ETKRAYREAN YLLGD |
Detection Method: | ![]() |
Confidence: | 9.06 |
Match: | 1lt7A |
Description: | Betaine-homocysteine S-methyltransferase |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [894-1014] |
1 11 21 31 41 51 | | | | | | 1 IVKVTPTSKV VGDLAQFMVS NKLTSDDVRR LANSLDFPDS VMDFFEGLIG QPYGGFPEPF 60 61 RSDVLRNKRR KLTCRPGLEL EPFDLEKIRE DLQNRFGDVD ECDVASYNMY PRVYEDFQKM 120 121 R |
Detection Method: | ![]() |
Confidence: | 9.41 |
Match: | 1dhpA |
Description: | Dihydrodipicolinate synthase |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [1015-1085] |
1 11 21 31 41 51 | | | | | | 1 ETYGDLSVLP TRSFLSPLET DEEIEVVIEQ GKTLIIKLQA VGDLNKKTGE REVYFDLNGE 60 61 MRKIRVADRS Q |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.847 | 0.031 | gluconeogenesis | b.34.5 | Translation proteins SH3-like domain |
Region A: Residues: [1086-1178] |
1 11 21 31 41 51 | | | | | | 1 KVETVTKSKA DMHDPLHIGA PMAGVIVEVK VHKGSLIKKG QPVAVLSAMK MEMIISSPSD 60 61 GQVKEVFVSD GENVDSSDLL VLLEDQVPVE TKA |
Detection Method: | ![]() |
Confidence: | 81.927757 |
Match: | 1dczA_ |
Description: | Biotin carboxyl carrier domain of transcarboxylase (TC 1.3S) |
Matching Structure (courtesy of the PDB):![]() |