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View Structure Prediction Details

Protein: CWH41
Organism: Saccharomyces cerevisiae
Length: 833 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWH41.

Description E-value Query
Range
Subject
Range
CWH41_YEAST - Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWH...
CWH41 - Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein involved in assembly of ...
0.0 [1..833] [1..833]
gi|12324674, gi|... - pir||C96698 probable glucosidase I F12B7.4 [imported] - Arabidopsis thaliana, gi|12324674|gb|AAG5229...
0.0 [20..832] [84..874]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [20..832] [84..859]
gi|5453662, gi|2... - gi|5453662|ref|NP_006293.1| mannosyl-oligosaccharide glucosidase [Homo sapiens], gi|2344810|emb|CAA6...
0.0 [13..832] [61..834]
gi|85099224 - gi|85099224|ref|XP_960737.1| hypothetical protein NCU03657 [Neurospora crassa OR74A]
gi|11595535, gi|... - gi|32404692|ref|XP_322959.1| related to ER glucosidase I [MIPS] [Neurospora crassa], gi|28922257|gb|...
0.0 [35..831] [42..812]
MOGS_RAT - Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1
0.0 [13..832] [59..832]
GCS1_SCHPO - Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...
SPAC6G10.09 - glucosidase I Gls1
0.0 [13..832] [12..806]

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Predicted Domain #1
Region A:
Residues: [1-833]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLISKSKMFK TFWILTSIVL LASATVDISK LQEFEEYQKF TNESLLWAPY RSNCYFGMRP  60
   61 RYVHESPLIM GIMWFNSLSQ DGLHSLRHFA TPQDKLQKYG WEVYDPRIGG KEVFIDEKNN 120
  121 LNLTVYFVKS KNGENWSVRV QGEPLDPKRP STASVVLYFS QNGGEIDGKS SLAMIGHDGP 180
  181 NDMKFFGYSK ELGEYHLTVK DNFGHYFKNP EYETMEVAPG SDCSKTSHLS LQIPDKEVWK 240
  241 ARDVFQSLVS DSIRDILEKE ETKQRPADLI PSVLTIRNLY NFNPGNFHYI QKTFDLTKKD 300
  301 GFQFDITYNK LGTTQSISTR EQVTELITWS LNEINARFDK QFSFGEGPDS IESVEVKRRF 360
  361 ALETLSNLLG GIGYFYGNQL IDRETEFDES QFTEIKLLNA KEEGPFELFT SVPSRGFFPR 420
  421 GFYWDEGFHL LQIMEYDFDL AFEILASWFE MIEDDSGWIA REIILGNEAR SKVPQEFQVQ 480
  481 NPNIANPPTL LLAFSEMLSR AIENIGDFNS DSYHQVMFNS RTAKFMTNNL EANPGLLTEY 540
  541 AKKIYPKLLK HYNWFRKSQT GLIDEYEEIL EDEGIWDKIH KNEVYRWVGR TFTHCLPSGM 600
  601 DDYPRAQPPD VAELNVDALA WVGVMTRSMK QIAHVLKLTQ DEQRYAQIEQ EVVENLDLLH 660
  661 WSENDNCYCD ISIDPEDDEI REFVCHEGYV SVLPFALKLI PKNSPKLEKV VALMSDPEKI 720
  721 FSDYGLLSLS RQDDYFGKDE NYWRGPIWMN INYLCLDAMR YYYPEVILDV AGEASNAKKL 780
  781 YQSLKINLSN NIYKVWEEQG YCYENYSPID GHGTGAEHFT GWTALVVNIL GRF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 1000.0
Match: PF03200
Description: Mannosyl oligosaccharide glucosidase

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DMKFFGYSKE LGEYHLTVKD NFGHYFKNPE YETMEVAPGS DCSKTSHLSL QIPDKEVWKA  60
   61 RDVFQSLVSD SIRDILEKEE TKQRPADLIP SVLT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [276-833]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRNLYNFNPG NFHYIQKTFD LTKKDGFQFD ITYNKLGTTQ SISTREQVTE LITWSLNEIN  60
   61 ARFDKQFSFG EGPDSIESVE VKRRFALETL SNLLGGIGYF YGNQLIDRET EFDESQFTEI 120
  121 KLLNAKEEGP FELFTSVPSR GFFPRGFYWD EGFHLLQIME YDFDLAFEIL ASWFEMIEDD 180
  181 SGWIAREIIL GNEARSKVPQ EFQVQNPNIA NPPTLLLAFS EMLSRAIENI GDFNSDSYHQ 240
  241 VMFNSRTAKF MTNNLEANPG LLTEYAKKIY PKLLKHYNWF RKSQTGLIDE YEEILEDEGI 300
  301 WDKIHKNEVY RWVGRTFTHC LPSGMDDYPR AQPPDVAELN VDALAWVGVM TRSMKQIAHV 360
  361 LKLTQDEQRY AQIEQEVVEN LDLLHWSEND NCYCDISIDP EDDEIREFVC HEGYVSVLPF 420
  421 ALKLIPKNSP KLEKVVALMS DPEKIFSDYG LLSLSRQDDY FGKDENYWRG PIWMNINYLC 480
  481 LDAMRYYYPE VILDVAGEAS NAKKLYQSLK INLSNNIYKV WEEQGYCYEN YSPIDGHGTG 540
  541 AEHFTGWTAL VVNILGRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2jf4A
Description: No description for 2jf4A was found.

Predicted functions:

Term Confidence Notes
hydrolase activity, hydrolyzing O-glycosyl compounds 3.49882811932206 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 3.13521240810366 bayes_pls_golite062009
catalytic activity 1.16285856935495 bayes_pls_golite062009
binding 1.06330183651166 bayes_pls_golite062009
trehalase activity 0.389375574251869 bayes_pls_golite062009
protein binding 0.18984948020481 bayes_pls_golite062009
alpha,alpha-trehalase activity 0.17719034423607 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle