| Protein: | PGD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 431 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PGD1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-4 | [43..356] | [138..468] |
|
Region A: Residues: [1-431] |
1 11 21 31 41 51
| | | | | |
1 MAPSEILKRT TETVTKTSSI RQRKTDTTAV KTTGMDSIIP AGVKLDDLQV ILAKNENETR 60
61 DKVCKQINEA RDEILPLRLQ FNEFIQIMAN IDQEGSKQAD RMAKYLHIRD KILQLNDRFQ 120
121 TLSSHLEALQ PLFSTVPEYL KTADNRDRSF QLLEPLSTYN KNGNAVCSTA TVVSTNHSAA 180
181 ASTPTTTATP HANPITHAHS LSNPNSTATM QHNPLAGKRG PKSGSTMGTP TVHNSTAAAP 240
241 IAAPKKPRKP RQTKKAKAQA QAQAQAQAQV YAQQSTVQTP ITASMAAALP NPTPSMINSV 300
301 SPTNVMGTPL TNMMSPMGNA YSMGAQNQGG QVSMSQFNGS GNGSNPNTNT NSNNTPLQSQ 360
361 LNLNNLTPAN ILNMSMNNDF QQQQQQQQQQ QQPQPQYNMN MGMNNMNNGG KELDSLDLNN 420
421 LELGGLNMDF L
|
| Detection Method: |  |
| Confidence: | 13.84 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
