| Protein: | STT3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 718 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STT3.
| Description | E-value | Query Range |
Subject Range |
|
|
857.0 | [0..12] | [714..68] |
|
|
854.0 | [0..12] | [714..68] |
|
|
854.0 | [0..12] | [714..65] |
|
Region A: Residues: [1-660] |
1 11 21 31 41 51
| | | | | |
1 MGSDRSCVLS VFQTILKLVI FVAIFGAAIS SRLFAVIKFE SIIHEFDPWF NYRATKYLVN 60
61 NSFYKFLNWF DDRTWYPLGR VTGGTLYPGL MTTSAFIWHA LRNWLGLPID IRNVCVLFAP 120
121 LFSGVTAWAT YEFTKEIKDA SAGLLAAGFI AIVPGYISRS VAGSYDNEAI AITLLMVTFM 180
181 FWIKAQKTGS IMHATCAALF YFYMVSAWGG YVFITNLIPL HVFLLILMGR YSSKLYSAYT 240
241 TWYAIGTVAS MQIPFVGFLP IRSNDHMAAL GVFGLIQIVA FGDFVKGQIS TAKFKVIMMV 300
301 SLFLILVLGV VGLSALTYMG LIAPWTGRFY SLWDTNYAKI HIPIIASVSE HQPVSWPAFF 360
361 FDTHFLIWLF PAGVFLLFLD LKDEHVFVIA YSVLCSYFAG VMVRLMLTLT PVICVSAAVA 420
421 LSKIFDIYLD FKTSDRKYAI KPAALLAKLI VSGSFIFYLY LFVFHSTWVT RTAYSSPSVV 480
481 LPSQTPDGKL ALIDDFREAY YWLRMNSDED SKVAAWWDYG YQIGGMADRT TLVDNNTWNN 540
541 THIAIVGKAM ASPEEKSYEI LKEHDVDYVL VIFGGLIGFG GDDINKFLWM IRISEGIWPE 600
601 EIKERDFYTA EGEYRVDARA SETMRNSLLY KMSYKDFPQL FNGGQATDRV RQQMITPLDV 660
661
|
| Detection Method: |  |
| Confidence: | 279.070581 |
| Match: | PF02516 |
| Description: | Oligosaccharyl transferase STT3 subunit |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [661-718] |
1 11 21 31 41 51
| | | | | |
1 PPLDYFDEVF TSENWMVRIY QLKKDDAQGR TLRDVGELTR SSTKTRRSIK RPELGLRV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.680 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.506 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.489 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.489 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.482 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.474 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.473 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.468 | d.224.1 | SufE-like |
| View | Download | 0.464 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.445 | a.64.2 | Bacteriocin AS-48 |
