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View Structure Prediction Details

Protein: SAP155
Organism: Saccharomyces cerevisiae
Length: 905 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAP155.

Description E-value Query
Range
Subject
Range
gi|14530202 - gi|14530202|emb|CAC42243.1| Sit4p phosphatase-associated protein [Saccharomyces cerevisiae]
0.0 [1..905] [98..1002]
gi|6179410 - gi|6179410|emb|CAB59918.1| hypothetical phosphatase associated protein [Candida albicans]
0.0 [9..755] [13..708]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [112..594] [9..531]
PP6R2_MOUSE - Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus musculus GN=Ppp6r2 PE=1 SV=1
0.0 [111..478] [4..364]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSSESSTTS FSSGSTSKTD LDEEDISNAT APMMVTTKNL DNSFIERMLV ETELLNELSR  60
   61 QNKTLLDFIC FGFFFDKKTN KKVNNMEYLV DQLMECISKI KTATTV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.397 a.26.1 4-helical cytokines
View Download 0.269 d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.285 a.47.2 t-snare proteins
View Download 0.437 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.315 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.264 a.69.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
View Download 0.240 b.55.1 PH domain-like
View Download 0.233 a.26.1 4-helical cytokines
View Download 0.206 d.150.1 4'-phosphopantetheinyl transferase

Predicted Domain #2
Region A:
Residues: [107-547]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLNNLIDYQE QQQLDDSSQE DVYVESDTEQ EEEKEDDNNS NNKKRRKRGS SSFGNDDINN  60
   61 NDDDDDANED DESAYLTKAT IISEIFSLDI WLISESLVKN QSYLNKIWSI INQPNFNSEN 120
  121 SPLVPIFLKI NQNLLLTRQD QYLNFIRTER SFVDDMLKHV DISLLMDFFL KIISTDKIES 180
  181 PTGIIELVYD QNLISKCLSF LNNKESPADI QACVGDFLKA LIAISANAPL DDISIGPNSL 240
  241 TRQLASPESI AKLVDIMINQ RGAALNTTVS IVIELIRKNN SDYDQVNLLT TTIKTHPPSN 300
  301 RDPIYLGYLL RKFSNHLSDF FQIILDIEND ANIPLHENQL HEKFKPLGFE RFKVVELIAE 360
  361 LLHCSNMGLM NSKRAERIAR RRDKVRSQLS HHLQDALNDL SIEEKEQLKT KHSPTRDTDH 420
  421 DLKNNNGKID NDNNDNDDES D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [548-600]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YGDEIDESFE IPYINMKQTI KLRTDPTVGD LFKIKLYDTR IVSKIMELFL THP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.397 a.60.1 SAM/Pointed domain
View Download 0.428 a.5.1 DNA helicase RuvA subunit, C-terminal domain
View Download 0.585 a.50.1 Anaphylotoxins (complement system)
View Download 0.368 d.52.1 Alpha-lytic protease prodomain
View Download 0.421 d.58.49 YajQ-like
View Download 0.327 a.5.2 UBA-like
View Download 0.286 a.64.1 Saposin
View Download 0.266 a.60.2 RuvA domain 2-like
View Download 0.259 a.4.10 N-terminal Zn binding domain of HIV integrase
View Download 0.242 d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase
View Download 0.239 a.60.1 SAM/Pointed domain
View Download 0.230 a.4.5 "Winged helix" DNA-binding domain
View Download 0.225 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.225 a.60.3 C-terminal domain of RNA polymerase alpha subunit
View Download 0.218 g.34.1 HIV-1 VPU cytoplasmic domain
View Download 0.213 a.3.1 Cytochrome c
View Download 0.209 a.159.1 Protein serine/threonine phosphatase 2C, C-terminal domain
View Download 0.209 a.164.1 C-terminal domain of DFF45/ICAD (DFF-C domain)
View Download 0.205 a.153.1 Nuclear receptor coactivator interlocking domain
View Download 0.201 a.3.1 Cytochrome c

Predicted Domain #4
Region A:
Residues: [601-752]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WNNFWHNVIF DIIQQIFNGR MDFSYNSFLV LSLFNLKSSY QFMTDIVISD EKGTDVSRFS  60
   61 PVIRDPNFDF KITTDFILRG YQDSYKFYEL RKMNLGYMGH IVLIAEEVVK FSKLYKVELI 120
  121 SPDIQVILQT EEWQYYSEEV LNETRMMYSK IL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [753-905]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGGSYIDDGN GNIIPQLPDN TTVLTPNGDA SNNNEILDSD TGSSNGTSGG GQLINVESLE  60
   61 EQLSLSTESD LHNKLREMLI NRAQEDVDNK NTENGVFILG PPEDKNSNSN INNTNHNSNN 120
  121 SNNNDNNDNN DNDNDNTRNY NEDADNDNDY DHE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle