| Protein: | IOC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 787 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IOC3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..787] | [1..787] |
|
|
0.003 | [40..144] | [1585..1704] |
|
Region A: Residues: [1-217] |
1 11 21 31 41 51
| | | | | |
1 MDSPSNSIQN LQQEAQGSSS AQLADHDHDR VSMAMPLQTD QSVSVSQSSD NLRRSRRVPK 60
61 PRTSIYDEYE EELKERANKP KRKRPAPPKK KAPSTQNSKS NDKVEKKKTT SIAKDGKPTL 120
121 KTNDKKVAPK PKPAHEQVEP ALIPSNWTSV IPLLTSDFKN QYSVISRLKN PNMKPVPYAG 180
181 DIIKLMAFIN KFSSFFHSDL QNLSFQDFEV GLDLYPG
|
| Detection Method: |  |
| Confidence: | 8.62 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [218-787] |
1 11 21 31 41 51
| | | | | |
1 DPNGSAAGIV KGPEDTSLLL YPDFMAIKDI VYCQDKMNLL FLSLLDLTFT ENFDGKSAKK 60
61 KGPLTTWENL KSSSKKVFSN PLYRLRLVAR EWGYPREWRQ QLPSDQDISK PKTALFEQDE 120
121 QTPVVDPSHP EILTPNIYTW NANEPLPLES NPLYNREMDK NGILALKPMD RVVLLRALTD 180
181 WCASHSSAIH DEIYKLTHGK KDPVFGIQTQ QVPRYTIEGV DNTINQFKKL CSLIQSRYEI 240
241 RSKKKHFVKQ LKEGKKPDLS RKLEILKEIK AELKNAVKSE KDELLFSLYD KWVPLFEGEL 300
301 PDQPLANPFS ERLYKLRLQE FFLGRVPHIG DFYMPRLHSY GDSLEMSTFT DLRNLQALLS 360
361 KFKNNEYNAF TLFENDGQSM SAQFKLFYHD TPSLAHDVAR GRNTSGKVYW YELCHDSATL 420
421 LEFLEFLDYK IVKPQDEKKE GNEKEKEALN NEAHILEQKS TTDNNPSINT NPLPKDAKYN 480
481 TARKKLQILK EFLSDYYFIL RQFEQMKVQF ADMKPGKRQL RRIQRQTVNY NTEYDSEEYV 540
541 DDEEDDEADI YDDNDNDSSF DDGRVKRQRT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
