| Protein: | COS4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 379 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COS4.
| Description | E-value | Query Range |
Subject Range |
|
|
588.0 | [0..1] | [379..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MKENELKNEK SVDVLSFKQL ESQKIVLPQD LFRSSFTWFC YEIYKSLAFR IWMLLWLPLS 60
61 V
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [62-168] |
1 11 21 31 41 51
| | | | | |
1 WWKLSNNWIY PLMVSLLVLF WGPVFVLVIF RLSRKRSLSK QLTQFCKEIT KSTPSSDPHD 60
61 WEVVAANLNS YLYENKAWNI RYFFFNAMGC QEAFRTTLLE PFSLKKD
|
| Detection Method: | |
| Confidence: | 46.30103 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.957 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [169-241] |
1 11 21 31 41 51
| | | | | |
1 EAAKVKSFKD SVPYIEEALG VYFREVEKQW KLFNSEKSWS PVGLEDAKLP KEAYRFKLTW 60
61 FLKRISNIFM LIP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.847 | d.58.17 | Metal-binding domain |
|
Region A: Residues: [242-379] |
1 11 21 31 41 51
| | | | | |
1 FLNFLCCIYV SRGMCLLLRT LYLGWILFML VQGFQNIRVL IMSMEHKMQF LSTIINEQES 60
61 GANGWDEIAR KMNRYLFEKK VWKNEEFFFD GIDCEWFFSH FFYRVLSAKK SMRALSLNVE 120
121 LWPYIKEAQL SCSEESLA
|
| Detection Method: | |
| Confidence: | 59.275724 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
