| Protein: | COS4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 379 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COS4.
| Description | E-value | Query Range |
Subject Range |
|
|
588.0 | [0..1] | [379..1] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MKENELKNEK SVDVLSFKQL ESQKIVLPQD LFRSSFTWFC YEIYKSLAFR IWMLLWLPLS 60
61 V
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [62-168] |
1 11 21 31 41 51
| | | | | |
1 WWKLSNNWIY PLMVSLLVLF WGPVFVLVIF RLSRKRSLSK QLTQFCKEIT KSTPSSDPHD 60
61 WEVVAANLNS YLYENKAWNI RYFFFNAMGC QEAFRTTLLE PFSLKKD
|
| Detection Method: | |
| Confidence: | 46.30103 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.957 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.938 | N/A | N/A | a.24.21 | Description not found. |
| View | Download | 0.938 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.932 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.932 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.899 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.899 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.888 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.888 | N/A | N/A | a.29.2 | Bromodomain |
|
Region A: Residues: [169-241] |
1 11 21 31 41 51
| | | | | |
1 EAAKVKSFKD SVPYIEEALG VYFREVEKQW KLFNSEKSWS PVGLEDAKLP KEAYRFKLTW 60
61 FLKRISNIFM LIP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.847 | d.58.17 | Metal-binding domain |
| View | Download | 0.777 | d.74.5 | Hypothetical protein Yml108w |
| View | Download | 0.747 | d.58.49 | YajQ-like |
| View | Download | 0.747 | d.58.49 | YajQ-like |
| View | Download | 0.709 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.709 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.650 | d.58.17 | Metal-binding domain |
| View | Download | 0.649 | d.58.17 | Metal-binding domain |
| View | Download | 0.649 | d.58.17 | Metal-binding domain |
| View | Download | 0.541 | d.57.1 | DNA damage-inducible protein DinI |
|
Region A: Residues: [242-379] |
1 11 21 31 41 51
| | | | | |
1 FLNFLCCIYV SRGMCLLLRT LYLGWILFML VQGFQNIRVL IMSMEHKMQF LSTIINEQES 60
61 GANGWDEIAR KMNRYLFEKK VWKNEEFFFD GIDCEWFFSH FFYRVLSAKK SMRALSLNVE 120
121 LWPYIKEAQL SCSEESLA
|
| Detection Method: | |
| Confidence: | 59.275724 |
| Match: | PF00674 |
| Description: | DUP family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.692 | N/A | N/A | a.160.1 | Poly(A) polymerase, middle domain |
| View | Download | 0.510 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.510 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.481 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.437 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.437 | N/A | N/A | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.370 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.370 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.367 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.367 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
