YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YFL040W
Organism: Saccharomyces cerevisiae
Length: 540 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YFL040W.

Description E-value Query
Range		 Subject
Range
KHT2_KLULC - Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1
 0.0 [13..507] [50..544]
gi|171554 - gi|171554|gb|AAA34624.1| galactose permease
 0.0 [13..504] [59..548]
STC_RICCO - Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1
 0.0 [16..530] [16..523]
STP1_ARATH - Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2
 0.0 [17..516] [15..515]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 0.0 [17..502] [15..501]
gi|115470211, gi... - gi|50508995|dbj|BAD31944.1| putative monosaccharide transport protein MST1 [Oryza sativa Japonica Gr...
gi|125556956 - gi|125556956|gb|EAZ02492.1| hypothetical protein OsI_24597 [Oryza sativa Indica Group]
gi|11991114 - gi|11991114|dbj|BAB19864.1| monosaccharide transporter 3 [Oryza sativa]
 0.0 [16..500] [14..499]

Back

Predicted Domain #1
Region A:
Residues: [1-208] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAMKAIVWR LPKMPKIKIT KTYEVTKITA ILTLVGFIMG LEVPSLATFL TNKTFNEYFK  60
   61 YPTPLQQGLL MGSTPLGGIM GCFICCIMND RFSRIYQFQS GIIIWNIVTL LNFCIWDILG 120
  121 LLICRMIKGM ILGNFSILVA SYANEVIPRG KRGSTMSYIQ LCLTIGILVM HYLCIALSLW 180
  181 DSHFAFRIAW CIGIIPGLLF WMASYALP

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [259-479] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNDLDFSKKL PRGSFKPLIL GMTLQLLVQF SGINIILGYI TYICEIVGLE GNVKLFTSSI  60
   61 PYFINMVLSL LPITFIDYTS RKLITLLGGF PISGLLITIG ALFVKYGQDT KPIDGNRSLV 120
  121 WSIGENPFVG GWILTLCFLI VGIFAMSLSS IPWVYTNEML PSRVKVKGFA ICVTFGWLGN 180
  181 FILTFLCPVM IERLKGTTFI IFGSLTFLIS LSVLIWFPET K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 237.9897
Match: 1ja5A_
Description: No description for 1ja5A_ was found.

Predicted functions:

Term Confidence Notes
glycerol transmembrane transporter activity 7.11654923455995 bayes_pls_golite062009
alcohol transmembrane transporter activity 6.7545566917184 bayes_pls_golite062009
polyol transmembrane transporter activity 6.7545566917184 bayes_pls_golite062009
glycerol-3-phosphate transmembrane transporter activity 5.74077413704789 bayes_pls_golite062009
transporter activity 4.09176719149278 bayes_pls_golite062009
substrate-specific transporter activity 3.59744164024479 bayes_pls_golite062009
transmembrane transporter activity 3.5865018981083 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.54194478414824 bayes_pls_golite062009
hexose phosphate transmembrane transporter activity 3.3746965264994 bayes_pls_golite062009
glucose-6-phosphate transmembrane transporter activity 3.3746965264994 bayes_pls_golite062009
sugar:hydrogen symporter activity 2.99050613058546 bayes_pls_golite062009
cation:sugar symporter activity 2.99050613058546 bayes_pls_golite062009
monosaccharide transmembrane transporter activity 2.63293544825311 bayes_pls_golite062009
carbohydrate transmembrane transporter activity 2.62141276633776 bayes_pls_golite062009
sugar transmembrane transporter activity 2.47557586092261 bayes_pls_golite062009
ion transmembrane transporter activity 2.21266150105753 bayes_pls_golite062009
solute:hydrogen symporter activity 2.10485633822652 bayes_pls_golite062009
cation transmembrane transporter activity 1.79369588808394 bayes_pls_golite062009
active transmembrane transporter activity 1.59419818573076 bayes_pls_golite062009
binding 1.46605775041083 bayes_pls_golite062009
secondary active transmembrane transporter activity 1.22264637452409 bayes_pls_golite062009
symporter activity 0.74591237387473 bayes_pls_golite062009
solute:cation symporter activity 0.74591237387473 bayes_pls_golite062009
sugar binding 0.285073104957756 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [209-258] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESYHWLVLHG KMSEAQEIQH NLAKKFNESQ PRDAVPEMSK IELAGDFWIG

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [480-540] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMSIEDIDKF FEFESKEGTN LHGEKGIKTP DSNSNGGSTR SSQEGQLHKP IKLKSDEEMI  60
   61 I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 237.9897
Match: 1ja5A_
Description: No description for 1ja5A_ was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle