| Protein: | EPL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 832 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EPL1.
| Description | E-value | Query Range |
Subject Range |
|
|
492.0 | [0..24] | [770..3] |
|
|
478.0 | [0..30] | [831..31] |
|
|
414.0 | [0..51] | [494..2] |
|
|
410.0 | [0..51] | [494..2] |
|
|
409.0 | [0..51] | [494..2] |
|
|
393.0 | [0..51] | [494..2] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MPTPSNAIEI NDGSHKSGRS TRRSGSRSAH DDGLDSFSKG DSGAGASAGS SNSRFRHRKI 60
61 SVKQHLKIYL PNDLKHLDKD ELQQREVVEI ET
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-157] |
1 11 21 31 41 51
| | | | | |
1 GVEKNEEKEV HLHRILQMGS GHTKHKDYIP TPDASMTWNE YDKFYTGSFQ ETTSYIKFSA 60
61 TVEDC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [158-229] |
1 11 21 31 41 51
| | | | | |
1 CGTNYNMDER DETFLNEQVN KGSSDILTED EFEILCSSFE HAIHERQPFL SMDPESILSF 60
61 EELKPTLIKS DM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [230-359] |
1 11 21 31 41 51
| | | | | |
1 ADFNLRNQLN HEINSHKTHF ITQFDPVSQM NTRPLIQLIE KFGSKIYDYW RERKIEVNGY 60
61 EIFPQLKFER PGEKEEIDPY VCFRRREVRH PRKTRRIDIL NSQRLRALHQ ELKNAKDLAL 120
121 LVAKRENVSL
|
| Detection Method: | |
| Confidence: | 12.154902 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [360-444] |
1 11 21 31 41 51
| | | | | |
1 NWINDELKIF DQRVKIKNLK RSLNISGEDD DLINHKRKRP TIVTVEQREA ELRKAELKRA 60
61 AAAAAAAKAK NNKRNNQLED KSSRL
|
| Detection Method: | |
| Confidence: | 12.154902 |
| Match: | 1eqfA |
| Description: | TAFII250 double bromodomain module |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [445-538] |
1 11 21 31 41 51
| | | | | |
1 TKQQQQQLLQ QQQQQQQNAL KTENGKQLAN ASSSSTSQPI TSHVYVKLPS SKIPDIVLED 60
61 VDALLNSKEK NARKFVQEKM EKRKIEDADV FFNL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [539-832] |
1 11 21 31 41 51
| | | | | |
1 TDDPFNPVFD MSLPKNFSTS NVPFASIASS KFQIDRSFYS SHLPEYLKGI SDDIRIYDSN 60
61 GRSRNKDNYN LDTKRIKKTE LYDPFQENLE IHSREYPIKF RKRVGRSNIK YVDRMPNFTT 120
121 SSTKSACSLM DFVDFDSIEK EQYSREGSND TDSINVYDSK YDEFVRLYDK WKYDSPQNEY 180
181 GIKFSDEPAR LNQISNDTQV IRFGTMLGTK SYEQLREATI KYRRDYITRL KQKHIQHLQQ 240
241 QQQQQQQQQQ QAQQQKQKSQ NNNSNSSNSL KKLNDSLINS EAKQNSSITQ KNSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
