| Protein: | DEG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 442 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEG1.
| Description | E-value | Query Range |
Subject Range |
|
|
428.0 | [0..29] | [440..4] |
|
|
428.0 | [0..27] | [440..3] |
|
|
426.0 | [0..27] | [440..3] |
|
|
418.0 | [0..29] | [440..4] |
|
|
416.0 | [0..27] | [440..3] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MSNFIRRLVG KMKAISTGTN AIVSKKDSIY ANWSKEQLIR RITELENANK PHSEKFQHIE 60
61 DNKKRKISQE EVTRSKAKKA PKKFDFSKHN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-354] |
1 11 21 31 41 51
| | | | | |
1 TRFIALRFAY LGWNYNGLAV QKEYTPLPTV EGTILEAMNK CKLVPSMVLQ DYKFSRCGRT 60
61 DKGVSAMNQV ISLEVRSNLT DEEQRDPTND SREIPYVHVL NQLLPDDIRI SAVCLRPPPN 120
121 FDARFSCVHR HYKYIFNGKN LNIEKMSKAA SYFVGERDFR NFCKLDGSKQ ITNFKRTIIS 180
181 SKILPLSETF YCFDLVGSAF LWHQVRCMMA ILFLVGQSLE VPEIVLRLTD IEKTPQRPVY 240
241 EMANDIPLLL YDCKFPEMDW QEPT
|
| Detection Method: | |
| Confidence: | 78.0 |
| Match: | 2nqpA |
| Description: | No description for 2nqpA was found. |
|
Region A: Residues: [355-442] |
1 11 21 31 41 51
| | | | | |
1 VDDYKAIKFT TATEALTLHY ELKAAVCNIF KDVLPTANTN NFSKTIINLG DGRGKVVGTY 60
61 VKLEDRSVME PVEVVNAKYS KKKNNKNK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.898 | d.58.4 | Dimeric alpha+beta barrel |
