| Protein: | DEG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 442 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEG1.
| Description | E-value | Query Range |
Subject Range |
|
|
428.0 | [0..29] | [440..4] |
|
|
428.0 | [0..27] | [440..3] |
|
|
426.0 | [0..27] | [440..3] |
|
|
418.0 | [0..29] | [440..4] |
|
|
416.0 | [0..27] | [440..3] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MSNFIRRLVG KMKAISTGTN AIVSKKDSIY ANWSKEQLIR RITELENANK PHSEKFQHIE 60
61 DNKKRKISQE EVTRSKAKKA PKKFDFSKHN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.212 | b.92.1 | Composite domain of metallo-dependent hydrolases |
|
Region A: Residues: [91-354] |
1 11 21 31 41 51
| | | | | |
1 TRFIALRFAY LGWNYNGLAV QKEYTPLPTV EGTILEAMNK CKLVPSMVLQ DYKFSRCGRT 60
61 DKGVSAMNQV ISLEVRSNLT DEEQRDPTND SREIPYVHVL NQLLPDDIRI SAVCLRPPPN 120
121 FDARFSCVHR HYKYIFNGKN LNIEKMSKAA SYFVGERDFR NFCKLDGSKQ ITNFKRTIIS 180
181 SKILPLSETF YCFDLVGSAF LWHQVRCMMA ILFLVGQSLE VPEIVLRLTD IEKTPQRPVY 240
241 EMANDIPLLL YDCKFPEMDW QEPT
|
| Detection Method: | |
| Confidence: | 78.0 |
| Match: | 2nqpA |
| Description: | No description for 2nqpA was found. |
|
Region A: Residues: [355-442] |
1 11 21 31 41 51
| | | | | |
1 VDDYKAIKFT TATEALTLHY ELKAAVCNIF KDVLPTANTN NFSKTIINLG DGRGKVVGTY 60
61 VKLEDRSVME PVEVVNAKYS KKKNNKNK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.898 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.892 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.892 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.881 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.881 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.864 | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
| View | Download | 0.808 | d.240.1 | Description not found. |
| View | Download | 0.778 | d.58.12 | eEF-1beta-like |
| View | Download | 0.776 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
