YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DNF1
Organism: Saccharomyces cerevisiae
Length: 1571 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNF1.

Description E-value Query
Range
Subject
Range
DNF2 - Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane; contribute...
ATC4_YEAST - Phospholipid-transporting ATPase DNF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DN...
0.0 [8..1571] [24..1611]
gi|15231408 - gi|15231408|ref|NP_188006.1| haloacid dehalogenase-like hydrolase family protein [Arabidopsis thalia...
0.0 [270..1453] [32..1219]
SPAC4F10.16c - P-type ATPase
ATCZ_SCHPO - Putative phospholipid-transporting ATPase C4F10.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC ...
0.0 [56..1412] [30..1317]

Back

Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTFHGDGH APMSPFEDTF QFEDNSSNED THIAPTHFDD GATSNKYSRP QVSFNDETPK  60
   61 NKREDAEEFT FNDDTEYDNH SFQPTPKLNN GSGTFDDVEL DNDSGEPHTN YDGMKRFRMG 120
  121 TKRNKKGNPI MGRSKTLKWA RKNIPNPFED FTKDDIDPGA INRAQELRTV YYNMPLPKDM 180
  181 IDEEGNPIMQ YPRNKIRTTK YTPLTFLPKN ILFQFHNFAN VYFLVLIILG AFQIFGVTNP 240
  241 GLSAVPLVVI VIITAIKDAI EDSRRTVLDL EVNNTKTHIL EG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [283-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VENENVSTDN ISLWRRFKKA NSRLL

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [383-539]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RSLPPRTDCK FAKNYWKGVK VGDIVRIHNN DEIPADIILL STSDTDGACY VETKNLDGET  60
   61 NLKVRQSLKC TNTIRTSKDI ARTKFWIESE GPHSNLYTYQ GNMKWRNLAD GEIRNEPITI 120
  121 NNVLLRGCTL RNTKWAMGVV MFTGGDTKIM LNSGITP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1023.9794
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #3
Region A:
Residues: [308-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKFIQYCKEH LTEEGKKKRM QRKRHELRVQ KTVGTSGPRS SLDSIDSYRV SADYGRPSLD  60
   61 YDNLE

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [540-624]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKKSRISREL NFSVVINFVL LFILCFVSGI ANGVYYDKKG RSRFSYEFGT IAGSAATNGF  60
   61 VSFWVAVILY QSLVPISLYI SVEII

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [1180-1418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYKRLAEMIP EFFYKNMIFA LALFWYGIYN DFDGSYLYEY TYMMFYNLAF TSLPVIFLGI  60
   61 LDQDVNDTIS LVVPQLYRVG ILRKEWNQRK FLWYMLDGLY QSIICFFFPY LVYHKNMIVT 120
  121 SNGLGLDHRY FVGVYVTTIA VISCNTYVLL HQYRWDWFSG LFIALSCLVV FAWTGIWSSA 180
  181 IASREFFKAA ARIYGAPSFW AVFFVAVLFC LLPRFTYDSF QKFFYPTDVE IVREMWQHG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1023.9794
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #4
Region A:
Residues: [373-382]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGAGEANIVD 

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [625-674]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTAQAAFIYG DVLLYNAKLD YPCTPKSWNI SDDLGQVEYI FSDKTGTLTQ 

[Run NCBI BLAST on this sequence.]

Region C:
Residues: [967-1179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQDGVPDCIE LLAEAGIKLW VLTGDKVETA INIGFSCNLL NNEMELLVIK TTGDDVKEFG  60
   61 SEPSEIVDAL LSKYLKEYFN LTGSEEEIFE AKKDHEFPKG NYAIVIDGDA LKLALYGEDI 120
  121 RRKFLLLCKN CRAVLCCRVS PSQKAAVVKL VKDSLDVMTL AIGDGSNDVA MIQSADVGIG 180
  181 IAGEEGRQAV MCSDYAIGQF RYLARLVLVH GRW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1023.9794
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #5
Region A:
Residues: [675-966]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVMEFKKCTI NGVSYGRAYT EALAGLRKRQ GIDVETEGRR EKAEIAKDRD TMIDELRALS  60
   61 GNSQFYPEEV TFVSKEFVRD LKGASGEVQQ RCCEHFMLAL ALCHSVLVEA NPDNPKKLDL 120
  121 KAQSPDEAAL VATARDVGFS FVGKTKKGLI IEMQGIQKEF EILNILEFNS SRKRMSCIVK 180
  181 IPGLNPGDEP RALLICKGAD SIIYSRLSRQ SGSNSEAILE KTALHLEQYA TEGLRTLCIA 240
  241 QRELSWSEYE KWNEKYDIAA ASLANREDEL EVVADSIERE LILLGGTAIE DR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1023.9794
Match: 1eulA_
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M

Predicted Domain #6
Region A:
Residues: [1419-1571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HFDHYPPGYD PTDPNRPKVT KAGQHGEKII EGIALSDNLG GSNYSRDSVV TEEIPMTFMH  60
   61 GEDGSPSGYQ KQETWMTSPK ETQDLLQSPQ FQQAQTFGRG PSTNVRSSLD RTREQMIATN 120
  121 QLDNRYSVER ARTSLDLPGV TNAASLIGTQ QNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle