| Protein: | SPT2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 333 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPT2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..333] | [1..333] |
|
|
0.004 | [229..330] | [20..120] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSFLSKLSQI RKSTTASKAQ VQDPLPKKND EEYSLLPKNY IRDEDPAVKR LKELRRQELL 60
61 KNGALAKKSG VKRKRGTSSG SEKKKIERND DDE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.361 | a.1.1 | Globin-like |
| View | Download | 0.470 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.429 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.321 | d.58.48 | MTH1187-like |
| View | Download | 0.364 | a.46.1 | Methionine synthase domain |
| View | Download | 0.314 | a.39.3 | Cloroperoxidase |
| View | Download | 0.307 | a.77.1 | DEATH domain |
| View | Download | 0.253 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.243 | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.205 | a.61.1 | Retroviral matrix proteins |
|
Region A: Residues: [94-333] |
1 11 21 31 41 51
| | | | | |
1 GGLGIRFKRS IGASHAPLKP VVRKKPEPIK KMSFEELMKQ AENNEKQPPK VKSSEPVTKE 60
61 RPHFNKPGFK SSKRPQKKAS PGATLRGVSS GGNSIKSSDS PKPVKLNLPT NGFAQPNRRL 120
121 KEKLESRKQK SRYQDDYDEE DNDMDDFIED DEDEGYHSKS KHSNGPGYDR DEIWAMFNRG 180
181 KKRSEYDYDE LEDDDMEANE MEILEEEEMA RKMARLEDKR EEAWLKKHEE EKRRRKKGIR 240
241
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
