| Protein: | COG3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 801 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COG3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..801] | [1..801] |
|
|
0.0 | [70..758] | [117..802] |
|
|
0.0 | [75..756] | [103..701] |
|
Region A: Residues: [1-414] |
1 11 21 31 41 51
| | | | | |
1 MARSRKNSLV RDIASHPTIP ESQTIVGLLD DSYLFDKLKK LSLAVENSDS LQRTDVSEGC 60
61 SEVNGSEATT SADVKKTNKY LYYTTYLDQL NIKIDEYKVV LDQTRQVNDQ LDSSIKKFRK 120
121 ISQDTGAFIE ETKTIYEKQS KLSNLTESIP KALHYFEVLD PIMRRLNHAT SPAIVKKSSF 180
181 TTMLATIDES LRFLDENSDL KDAAAYRIKF KQCLIRACEL ISHFLTNLLK QTNQEILDKT 240
241 KNKNSLTGLP STTRDAFLYS KFYTIADTFK IQVSEIVKRS NEKAYNKYHD ELNSILYECF 300
301 NHYFQTRLRL LTPVIWSHID EIVVKDKDQG LVKFIQDGKV YFQQLCADEY KLFVEFFPEK 360
361 ECRFKINQWF LQLCEPLYDS IRVRVLKETD ICTLCDSVTL FAPYYEFEEG SEEY
|
| Detection Method: |  |
| Confidence: | 9.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [415-533] |
1 11 21 31 41 51
| | | | | |
1 VKQFTDIQYD KLFEPIVQKV QARLILRVQI YVQQNILSYR PTRDVFMISN RRRKSKTSLQ 60
61 GGNEDATTSD DNPDPLLESY LSSFKNRSIL PISPNDADDK SIDSEESTDK ISQLQTYYP
|
| Detection Method: | |
| Confidence: | 9.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [534-655] |
1 11 21 31 41 51
| | | | | |
1 PLLKTLALLS KIYEMINSVV FDDLAHHVVH DCIVSLRNAY DMVIKSSAGK SDFNNLDISL 60
61 AYLKNLLMLR DSIQNFNIQY TVNETYLDFS GVEGFFKSLK ENGRNVLKKT KSSSILTLAR 120
121 EL
|
| Detection Method: | |
| Confidence: | 9.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [656-801] |
1 11 21 31 41 51
| | | | | |
1 VPKVVNNMVD ARTELISELR NVIKDFTEST SLELIDDTLD INSDEDLLSK NVKLRENIKA 60
61 RLPRIYEQIL NYIDDQEIVT NLLDAVQELI TQSYSKYYET ITELAENGKF AKDQVADVMY 120
121 LDVFTDFFAK EVADLLRNGD IDTITK
|
| Detection Method: | |
| Confidence: | 9.74 |
| Match: | 1qgkA |
| Description: | Importin beta |
| Matching Structure (courtesy of the PDB): |
|
