| Protein: | UBP5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 805 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBP5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..805] | [1..805] |
|
|
0.0 | [20..804] | [15..794] |
|
|
9.0E-96 | [268..802] | [104..610] |
|
|
4.0E-94 | [275..802] | [66..557] |
|
|
2.0E-90 | [267..802] | [103..597] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MGSEQALSEV VESAKERFGR LRHLVQKFLD DDDVPQECLP LLQECAEIWS SYVDACQDIT 60
61 MQAPKEDANR LSKGFLRLNE TAFLYYMIVY TLLEDTLPRL KEFSSNKDQN VRNLYGERIQ 120
121 LLHNDPNIER IRNVIENYPK FIQLQTI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.977 | 0.069 | protein deubiquitination | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [148-277] |
1 11 21 31 41 51
| | | | | |
1 EPGKLSSMLH FHGDALLLID VRPRSEFVRA HIKCKNIICI DPASFKDSFT DQQIESVSLI 60
61 TSPHSDITFF SNRDKFKFII LYTDTQLHNN FQQRQTRILA KILSQNSVIK PLSGTKILIL 120
121 ENGFSNWVKL
|
| Detection Method: | |
| Confidence: | 21.055517 |
| Match: | PF00581 |
| Description: | Rhodanese-like domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 1.7573477158791 | bayes_pls_golite062009 |
| protein binding | 1.56261884445895 | bayes_pls_golite062009 |
| protein tyrosine phosphatase activity | 0.711045884031031 | bayes_pls_golite062009 |
| catalytic activity | 0.660280721417663 | bayes_pls_golite062009 |
| phosphoprotein phosphatase activity | 0.514129714366787 | bayes_pls_golite062009 |
| transferase activity | 0.24413644201982 | bayes_pls_golite062009 |
| phosphatase activity | 0.0126182055752568 | bayes_pls_golite062009 |
|
Region A: Residues: [278-488] |
1 11 21 31 41 51
| | | | | |
1 GGAYQSSVSE TAHLTSSSST PAFGSPQVPT GLFNQKSLSP NKDKSMPMVS MNTQPLLTTV 60
61 QRPQLPLYYS DLPIIPQPSP NRNSPTVQKF SPHPPTTLSK LNTPSTIQNK ANTVERISPD 120
121 IRAAQAHAYL PPASNVFSPR IPPLPQQNLS SSRQTILNNS QVLDLDLIVG LENIGNCCYM 180
181 NCILQCLVGT HDLVRMFLDN TYLNFINFDS S
|
| Detection Method: | |
| Confidence: | 8.74 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
|
Region A: Residues: [489-540] |
1 11 21 31 41 51
| | | | | |
1 RGSKGLLAKN FAILVNNMHR HGAFTPPNVR TIPVQTIQFK KICGHINPMY SD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [541-670] |
1 11 21 31 41 51
| | | | | |
1 SMQQDCQEFC QFLLDGLHED LNQNGSKKHL KQLSDEEERM REKMSIRKAS ALEWERFLLT 60
61 DFSAIIDLFQ GQYASRLQCQ VCEHTSTTYQ TFSVLSVPVP RVKTCNILDC FREFTKCERL 120
121 GVDEQWSCPK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [671-739] |
1 11 21 31 41 51
| | | | | |
1 CLKKQPSTKQ LKITRLPKKL IINLKRFDNQ MNKNNVFVQY PYSLDLTPYW ARDFNHEAIV 60
61 NEDIPTRGQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.873 | 0.066 | protein deubiquitination | b.84.2 | Rudiment single hybrid motif |
|
Region A: Residues: [740-805] |
1 11 21 31 41 51
| | | | | |
1 VPPFRYRLYG VACHSGSLYG GHYTSYVYKG PKKGWYFFDD SLYRPITFST EFITPSAYVL 60
61 FYERIF
|
| Detection Method: | |
| Confidence: | 27.113509 |
| Match: | PF00443 |
| Description: | Ubiquitin carboxyl-terminal hydrolase |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
