| Protein: | DDI1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 428 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DDI1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-94 | [7..427] | [472..882] |
|
|
2.0E-91 | [7..427] | [514..924] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MDLTISNELT GEIYGPIEVS EDMALTDLIA LLQADCGFDK TKHDLYYNMD ILDSNRTQSL 60
61 KELGLKTDDL LLIRGKISNS IQ
|
| Detection Method: |  |
| Confidence: | 20.39794 |
| Match: | 1aarA_ |
| Description: | Ubiquitin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.55392638191535 | bayes_pls_golite062009 |
| protein binding | 1.54942742559883 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 1.28693841442604 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.670372579002346 | bayes_pls_golite062009 |
| hydrolase activity | 0.385840034768257 | bayes_pls_golite062009 |
|
Region A: Residues: [83-151] |
1 11 21 31 41 51
| | | | | |
1 TDAATLSDEA FIEQFRQELL NNQMLRSQLI LQIPGLNDLV NDPLLFRERL GPLILQRRYG 60
61 GYNTAMNPF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.849 | 0.263 | SNARE binding | a.77.1 | DEATH domain |
| View | Download | 0.502 | 0.263 | SNARE binding | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
| View | Download | 0.398 | 0.263 | SNARE binding | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.639 | 0.263 | SNARE binding | a.77.1 | DEATH domain |
| View | Download | 0.419 | 0.263 | SNARE binding | a.77.1 | DEATH domain |
| View | Download | 0.389 | 0.263 | SNARE binding | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.386 | 0.263 | SNARE binding | a.139.1 | Type I dockerin domain |
| View | Download | 0.381 | 0.263 | SNARE binding | a.140.1 | LEM domain |
| View | Download | 0.376 | 0.263 | SNARE binding | a.156.1 | S13-like H2TH domain |
| View | Download | 0.371 | 0.263 | SNARE binding | a.140.1 | LEM domain |
| View | Download | 0.321 | 0.263 | SNARE binding | a.4.1 | Homeodomain-like |
| View | Download | 0.308 | 0.263 | SNARE binding | a.156.1 | S13-like H2TH domain |
| View | Download | 0.290 | 0.263 | SNARE binding | d.26.1 | FKBP-like |
| View | Download | 0.255 | 0.263 | SNARE binding | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.234 | 0.263 | SNARE binding | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.231 | 0.263 | SNARE binding | d.15.2 | CAD & PB1 domains |
| View | Download | 0.227 | 0.263 | SNARE binding | a.140.2 | SAP domain |
| View | Download | 0.222 | 0.263 | SNARE binding | a.3.1 | Cytochrome c |
| View | Download | 0.216 | 0.263 | SNARE binding | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.207 | 0.263 | SNARE binding | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.206 | 0.263 | SNARE binding | a.64.1 | Saposin |
|
Region A: Residues: [152-304] |
1 11 21 31 41 51
| | | | | |
1 GIPQDEYTRL MANPDDPDNK KRIAELLDQQ AIDEQLRNAI EYTPEMFTQV PMLYINIEIN 60
61 NYPVKAFVDT GAQTTIMSTR LAKKTGLSRM IDKRFIGEAR GVGTGKIIGR IHQAQVKIET 120
121 QYIPCSFTVL DTDIDVLIGL DMLKRHLACV DLK
|
| Detection Method: | |
| Confidence: | 19.69897 |
| Match: | 2aidA_ |
| Description: | Human immunodeficiency virus type 1 protease |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [305-387] |
1 11 21 31 41 51
| | | | | |
1 ENVLRIAEVE TSFLSEAEIP KSFQEGLPAP TSVTTSSDKP LTPTKTSSTL PPQPGAVPAL 60
61 APRTGMGPTP TGRSTAGATT ATG
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 1rvnA_ |
| Description: | No description for 1rvnA_ was found. |
|
Region A: Residues: [388-428] |
1 11 21 31 41 51
| | | | | |
1 RTFPEQTIKQ LMDLGFPRDA VVKALKQTNG NAEFAASLLF Q
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1dv0A_ |
| Description: | DNA repair protein Hhr23a |
Matching Structure (courtesy of the PDB): |
|
