| Protein: | NUP157 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1391 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP157.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [83..1347] | [15..1324] |
|
|
0.0 | [115..1336] | [50..1290] |
|
|
0.0 | [115..1336] | [50..1290] |
|
|
0.0 | [15..1390] | [16..1495] |
|
|
0.0 | [132..1373] | [56..1287] |
|
|
0.0 | [83..1347] | [14..1323] |
|
|
0.0 | [84..1347] | [11..1303] |
|
Region A: Residues: [1-65] |
1 11 21 31 41 51
| | | | | |
1 MYSTPLKKRI DYDRETFTAS ASLGGNRLRN RPRDDQNNGK PNLSSRSFLS ERKTRKDVLN 60
61 KYGEA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.249 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.249 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
|
Region A: Residues: [66-1391] |
1 11 21 31 41 51
| | | | | |
1 GNTIESELRD VTTHVKISGL TSSEPLQLAS EFVQDLSFRD RNTPILDNPD YYSKGLDYNF 60
61 SDEVGGLGAF TPFQRQQVTN IPDEVLSQVS NTEIKSDMGI FLELNYCWIT SDNKLILWNI 120
121 NNSSEYHCID EIEHTILKVK LVKPSPNTFV SSVENLLIVA TLFDIYILTI SFNDRTHELN 180
181 IFNTGLKVNV TGFNVSNIIS YERTGQIFFT GATDGVNVWE LQYNCSENLF NSKSNKICLT 240
241 KSNLANLLPT KLIPSIPGGK LIQKVLEGDA GTEEETISQL EVDQSRGVLH TLSTKSIVRS 300
301 YLITSNGLVG PVLIDAAHIR RGMNALGVKN SPLLSNRAFK IAKIVSISMC ENNDLFLAVI 360
361 TTTGVRLYFK GSISRRSIGS LKLDSVKFPP TSISSSLEQN KSFIIGHHPL NTHDTGPLST 420
421 QKASSTYINT TCASTIISPG IYFTCVRKRA NSGELSKGIT NKALLENKEE HKLYVSAPDY 480
481 GILKNYGKYV ENTALLDTTD EIKEIVPLTR SFNYTSTPQG YANVFASQYS AEPLKVAVLT 540
541 SNALEIYCYR TPDEVFESLI ENPLPFIHSY GLSEACSTAL YLACKFNKSE HIKSSALAFF 600
601 SAGIPGVVEI KPKSSRESGS VPPISQNLFD KSGECDGIVL SPRFYGSALL ITRLFSQIWE 660
661 ERVFVFKRAS KTEKMDAFGI SITRPQVEYY LSSISVLADF FNIHRPSFVS FVPPKGSNAI 720
721 TASDAESIAM NALILLINSI KDALSLINVF YEDIDAFKSL LNTLMGAGGV YDSKTREYFF 780
781 DLKFHDLFTP NAKTKQLIKE ILIEVVNANI ASGTSADYIV NVLKERFGSF CHSADILCYR 840
841 AGEHLEAAQK FEMIDSKISR NHLDTAIDLY ERCAENIELC ELRRVVDIMV KLNYQPKTVG 900
901 FLLRFADKID KGNQAQEYVS RGCNTADPRK VFYDKRINVY TLIFEIVKSV DDYTSIEQSP 960
961 SIANISIFSP ASSLKKRVYS VIMNSNNRFF HYCFYDWLVA NKRQDYLLRL DSQFVLPYLK1020
1021 ERAEKSLEIS NLLWFYLFKE EHFLEAADVL YALASSDFDL KLSERIECLA RANGLCDSST1080
1081 SFDQKPALVQ LSENIHELFD IASIQDDLLN LVRNETRIDE DYRKQLTLKL NGRVLPLSDL1140
1141 FNDCADPLDY YEIKLRIFKV SQFKDEKVIQ GEWNRLLDSM KNAPSPDVGS VGQESFLSSI1200
1201 SNTLIRIGKT TRDTDVVFPV HFLMNKILES FIDKSSAADG SVCSMFLLAG VSHLKLYYIL1260
1261 SRIIENSEGN VELAKKEMVW LIKDWYQSDS DLRGSIAPEQ IKKLEKYDPN TDPVQDYVKD1320
1321 RHHGLK
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | PF03177 |
| Description: | Non-repetitive/WGA-negative nucleoporin |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [258-331] |
1 11 21 31 41 51
| | | | | |
1 FNVSNIISYE RTGQIFFTGA TDGVNVWELQ YNCSENLFNS KSNKICLTKS NLANLLPTKL 60
61 IPSIPGGKLI QKVL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [332-437] |
1 11 21 31 41 51
| | | | | |
1 EGDAGTEEET ISQLEVDQSR GVLHTLSTKS IVRSYLITSN GLVGPVLIDA AHIRRGMNAL 60
61 GVKNSPLLSN RAFKIAKIVS ISMCENNDLF LAVITTTGVR LYFKGS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [438-672] |
1 11 21 31 41 51
| | | | | |
1 ISRRSIGSLK LDSVKFPPTS ISSSLEQNKS FIIGHHPLNT HDTGPLSTQK ASSTYINTTC 60
61 ASTIISPGIY FTCVRKRANS GELSKGITNK ALLENKEEHK LYVSAPDYGI LKNYGKYVEN 120
121 TALLDTTDEI KEIVPLTRSF NYTSTPQGYA NVFASQYSAE PLKVAVLTSN ALEIYCYRTP 180
181 DEVFESLIEN PLPFIHSYGL SEACSTALYL ACKFNKSEHI KSSALAFFSA GIPGV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [673-856] |
1 11 21 31 41 51
| | | | | |
1 VEIKPKSSRE SGSVPPISQN LFDKSGECDG IVLSPRFYGS ALLITRLFSQ IWEERVFVFK 60
61 RASKTEKMDA FGISITRPQV EYYLSSISVL ADFFNIHRPS FVSFVPPKGS NAITASDAES 120
121 IAMNALILLI NSIKDALSLI NVFYEDIDAF KSLLNTLMGA GGVYDSKTRE YFFDLKFHDL 180
181 FTPN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [857-915] |
1 11 21 31 41 51
| | | | | |
1 AKTKQLIKEI LIEVVNANIA SGTSADYIVN VLKERFGSFC HSADILCYRA GEHLEAAQK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [916-1059] |
1 11 21 31 41 51
| | | | | |
1 FEMIDSKISR NHLDTAIDLY ERCAENIELC ELRRVVDIMV KLNYQPKTVG FLLRFADKID 60
61 KGNQAQEYVS RGCNTADPRK VFYDKRINVY TLIFEIVKSV DDYTSIEQSP SIANISIFSP 120
121 ASSLKKRVYS VIMNSNNRFF HYCF
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1060-1247] |
1 11 21 31 41 51
| | | | | |
1 YDWLVANKRQ DYLLRLDSQF VLPYLKERAE KSLEISNLLW FYLFKEEHFL EAADVLYALA 60
61 SSDFDLKLSE RIECLARANG LCDSSTSFDQ KPALVQLSEN IHELFDIASI QDDLLNLVRN 120
121 ETRIDEDYRK QLTLKLNGRV LPLSDLFNDC ADPLDYYEIK LRIFKVSQFK DEKVIQGEWN 180
181 RLLDSMKN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1248-1391] |
1 11 21 31 41 51
| | | | | |
1 APSPDVGSVG QESFLSSISN TLIRIGKTTR DTDVVFPVHF LMNKILESFI DKSSAADGSV 60
61 CSMFLLAGVS HLKLYYILSR IIENSEGNVE LAKKEMVWLI KDWYQSDSDL RGSIAPEQIK 120
121 KLEKYDPNTD PVQDYVKDRH HGLK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
