| Protein: | RNR1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 888 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNR1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..888] | [1..888] |
|
|
0.0 | [1..888] | [17..885] |
|
|
0.0 | [1..888] | [1..854] |
|
|
0.0 | [1..780] | [1..795] |
|
|
0.0 | [1..761] | [1..757] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MYVYKRDGRK EPVQFDKITA RISRLCYGLD PKHIDAVKVT QRIISGVYEG VTTIELDNLA 60
61 AETCAYMTTV HPDYATLAAR IAISNLHKQT TKQFSKVVED LYRYVNAATG KPAPMISDDV 120
121 YNIVMENKDK LNSAIVYDRD FQYSYFGFKT LERSYLLRIN GQVAERPQHL IMRVALGIHG 180
181 RDIEAALETY
|
|
Region B: Residues: [630-640] |
1 11 21 31 41 51
| | | | | |
1 SRRVLSGEFQ V
|
| Detection Method: |  |
| Confidence: | 1616.9897 |
| Match: | 2r1rA_ |
| Description: | R1 subunit of ribonucleotide reductase, N-terminal domain; R1 subunit of ribonucleotide reductase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [191-629] |
1 11 21 31 41 51
| | | | | |
1 NLMSLKYFTH ASPTLFNAGT PKPQMSSCFL VAMKEDSIEG IYDTLKECAL ISKTAGGIGL 60
61 HIHNIRSTGS YIAGTNGTSN GLIPMIRVFN NTARYVDQGG NKRPGAFALY LEPWHADIFD 120
121 FIDIRKNHGK EEIRARDLFP ALWIPDLFMK RVEENGTWTL FSPTSAPGLS DCYGDEFEAL 180
181 YTRYEKEGRG KTIKAQKLWY SILEAQTETG TPFVVYKDAC NRKSNQKNLG VIKSSNLCCE 240
241 IVEYSAPDET AVCNLASVAL PAFIETSEDG KTSTYNFKKL HEIAKVVTRN LNRVIDRNYY 300
301 PVEEARKSNM RHRPIALGVQ GLADTFMLLR LPFDSEEARL LNIQIFETIY HASMEASCEL 360
361 AQKDGPYETF QGSPASQGIL QFDMWDQKPY GMWDWDTLRK DIMKHGVRNS LTMAPMPTAS 420
421 TSQILGYNEC FEPVTSNMY
|
|
Region B: Residues: [641-803] |
1 11 21 31 41 51
| | | | | |
1 VNPYLLRDLV DLGIWDEGMK QYLITQNGSI QGLPNVPQEL KDLYKTVWEI SQKTIINMAA 60
61 DRSVYIDQSH SLNLFLRAPT MGKLTSMHFY GWKKGLKTGM YYLRTQAASA AIQFTIDQKI 120
121 ADQATENVAD ISNLKRPSYM PSSASYAASD FVPAAVTANA TIP
|
| Detection Method: | |
| Confidence: | 1616.9897 |
| Match: | 2r1rA_ |
| Description: | R1 subunit of ribonucleotide reductase, N-terminal domain; R1 subunit of ribonucleotide reductase, C-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [804-888] |
1 11 21 31 41 51
| | | | | |
1 SLDSSSEASR EASPAPTGSH SLTKGMAELN VQESKVEVPE VPAPTKNEEK AAPIVDDEET 60
61 EFDIYNSKVI ACAIDNPEAC EMCSG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
