Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARG5,6.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..863] | [1..863] |
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|
0.0 | [30..858] | [9..871] |
|
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0.0 | [64..861] | [50..855] |
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0.0 | [68..855] | [62..882] |
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0.0 | [68..855] | [62..882] |
|
|
0.0 | [67..496] | [7..428] |
|
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1.0E-99 | [507..862] | [29..401] |
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3.0E-96 | [523..862] | [17..375] |
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5.0E-96 | [541..862] | [2..339] |
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Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MPSASLLVST KRLNASKFQK FVSSLNKSTI AGFASVPLRA PPSVAFTRKK VGYSKRYVSS 60
61 TNGFSATRST VIQLLNNIST KREVEQYLKY FTSVSQ
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.562 | a.1.1 | Globin-like |
| View | Download | 0.417 | a.77.1 | DEATH domain |
| View | Download | 0.425 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.432 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.403 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.383 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.383 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.374 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.362 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.358 | a.118.1 | ARM repeat |
| View | Download | 0.354 | d.84.1 | Subtilisin inhibitor |
| View | Download | 0.350 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.347 | a.74.1 | Cyclin-like |
| View | Download | 0.344 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.340 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.332 | a.118.1 | ARM repeat |
| View | Download | 0.322 | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.314 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.306 | c.47.1 | Thioredoxin-like |
| View | Download | 0.304 | a.1.1 | Globin-like |
| View | Download | 0.292 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.288 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.287 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.285 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.281 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.273 | a.77.1 | DEATH domain |
| View | Download | 0.267 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.258 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.252 | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.249 | a.39.1 | EF-hand |
| View | Download | 0.244 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.240 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.239 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.234 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.231 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.226 | e.37.1 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
| View | Download | 0.226 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.215 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.214 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.209 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.202 | a.156.1 | S13-like H2TH domain |
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Region A: Residues: [97-361] |
1 11 21 31 41 51
| | | | | |
1 QQFAVIKVGG AIISDNLHEL ASCLAFLYHV GLYPIVLHGT GPQVNGRLEA QGIEPDYIDG 60
61 IRITDEHTMA VVRKCFLEQN LKLVTALEQL GVRARPITSG VFTADYLDKD KYKLVGNIKS 120
121 VTKEPIEASI KAGALPILTS LAETASGQML NVNADVAAGE LARVFEPLKI VYLNEKGGII 180
181 NGSTGEKISM INLDEEYDDL MKQSWVKYGT KLKIREIKEL LDYLPRSSSV AIINVQDLQK 240
241 ELFTDSGAGT MIRRGYKLVK RSSIG
|
| Detection Method: | |
| Confidence: | 86.512579 |
| Match: | 1gs5A_ |
| Description: | N-acetyl-l-glutamate kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [362-528] |
1 11 21 31 41 51
| | | | | |
1 EFPSADALRK ALQRDAGISS GKESVASYLR YLENSDFVSY ADEPLEAVAI VKKDTNVPTL 60
61 DKFVCSDAAW LNNVTDNVFN VLRRDFPALQ WVVSENDANI AWHFDKSQGS YLKGGKVLFW 120
121 YGIDDINTIS ELVENFVKSC DTASTLNSSA SSGVFANKKS ARSYSTR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [529-673] |
1 11 21 31 41 51
| | | | | |
1 STPRPEGVNT NPGRVALIGA RGYTGKNLVS LINGHPYLEV AHVSSRELKG QKLQDYTKSE 60
61 IIYESLQIQD IRKLEEQNAV DFWVMALPNK VCEPFVETIQ SVHGKSKIID LSADHRFVSE 120
121 SDWAYGLPEL NDRAKIANAA KIANP
|
| Detection Method: | |
| Confidence: | 65.522879 |
| Match: | 1gpdG_ |
| Description: | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [674-863] |
1 11 21 31 41 51
| | | | | |
1 GCYATGSQLT ISPLTKYING LPTVFGVSGY SGAGTKPSPK NDPKFLNNNL IPYALSDHIH 60
61 EREISARIGH NVAFMPHVGQ WFQGISLTVS IPIKKGSLSI DEIRKLYRNF YEDEKLVHVI 120
121 DDIPLVKDIE GTHGVVIGGF KLNDAEDRVV VCATIDNLLK GAATQCLQNI NLAMGYGEYA 180
181 GIPENKIIGV
|
| Detection Method: | |
| Confidence: | 65.522879 |
| Match: | 1gpdG_ |
| Description: | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |
| Matching Structure (courtesy of the PDB): |
|
