| Protein: | SAP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 897 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..897] | [1..897] |
|
|
0.0 | [344..894] | [199..730] |
|
|
0.0 | [331..891] | [180..713] |
|
|
0.0 | [316..890] | [136..681] |
|
|
0.0 | [210..897] | [102..732] |
|
|
0.0 | [344..891] | [129..673] |
|
|
0.0 | [210..897] | [102..732] |
|
|
0.0 | [256..895] | [142..766] |
|
|
0.0 | [320..895] | [202..778] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MDSQRSHHIL TRLTKIRRRP QQPLTDFTEL YSRIANETIY YLNLEEKKRY KEALQGWKAL 60
61 TTDVLFKQTL IEHNYPNTQS YTKDEVSLQN GIRELYHKSV MHLKRVKKLV REEPAPRNDM 120
121 PSSKTYTNHS SSFTRSTEPP PVFQMVPGRM MKTLRNR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.537 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.384 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.352 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.579 | a.24.4 | Hemerythrin |
| View | Download | 0.579 | a.24.4 | Hemerythrin |
| View | Download | 0.537 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.384 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.352 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.334 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.334 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.296 | a.26.1 | 4-helical cytokines |
| View | Download | 0.273 | a.7.4 | Smac/diablo |
| View | Download | 0.262 | a.39.1 | EF-hand |
| View | Download | 0.252 | a.26.1 | 4-helical cytokines |
| View | Download | 0.237 | a.1.1 | Globin-like |
| View | Download | 0.236 | a.63.1 | Apolipophorin-III |
| View | Download | 0.233 | a.74.1 | Cyclin-like |
| View | Download | 0.224 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.224 | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.222 | d.92.1 | Metalloproteases ("zincins"), catalytic domain |
| View | Download | 0.220 | a.39.1 | EF-hand |
| View | Download | 0.213 | f.14.1 | Voltage-gated potassium channels |
|
Region A: Residues: [158-323] |
1 11 21 31 41 51
| | | | | |
1 NACGYKTAYS NPSLSSYGNS TSIKRGEDAE NIRVNFVPSK PLSNNASRQH KNPIEHNDPP 60
61 LKKETELYSD KYISEPILID LTNDEDDHDV GILKGHNVFD EEESDGFEFD VSDYYDNFSE 120
121 VDVEEEEEEK EERRRIKTLE AIQQQMSDLS VTSSTSSNKS VSSSEN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.239 | 0.006 | ATPase activity | a.26.1 | 4-helical cytokines |
|
Region A: Residues: [324-404] |
1 11 21 31 41 51
| | | | | |
1 VPGSCIQSLP TTAPALPSLP PPPLLNVDRA SSTGALKPHS LETSTTMDSS KIRNPQISKL 60
61 MKNNHVPYLK GTKSTPTLIT K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.225 | a.74.1 | Cyclin-like |
|
Region A: Residues: [405-526] |
1 11 21 31 41 51
| | | | | |
1 STPTFITRSK SNTKPIIKSN ASSPTSSLTV PNSVIQKPKT AAMAAKRVLN SKKVASNPAL 60
61 NTTKKSHPIL KSKTAKVPNS SSKKTSSHPS RPVSNSKPYS HGASQNKKPS KNQTTSMSKT 120
121 NR
|
| Detection Method: | |
| Confidence: | 438.616428 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [527-601] |
1 11 21 31 41 51
| | | | | |
1 KIPAQKKIGS PKIEDVGTED ATEHATSLNE QREEPEIDKK VLREILEDEI IDSLQGVDRQ 60
61 AAKQIFAEIV VHGDE
|
| Detection Method: | |
| Confidence: | 438.616428 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [602-790] |
1 11 21 31 41 51
| | | | | |
1 VHWDDIAGLE SAKYSLKEAV VYPFLRPDLF RGLREPVRGM LLFGPPGTGK TMLARAVATE 60
61 SHSTFFSISA SSLTSKYLGE SEKLVRALFA IAKKLSPSII FVDEIDSIMG SRNNENENES 120
121 SRRIKNEFLV QWSSLSSAAA GSNKSNTNNS DTNGDEDDTR VLVLAATNLP WSIDEAARRR 180
181 FVRRQYIPL
|
| Detection Method: | |
| Confidence: | 438.616428 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [791-897] |
1 11 21 31 41 51
| | | | | |
1 PEDQTRHVQF KKLLSHQKHT LTESDFDELV KITEGYSGSD ITSLAKDAAM GPLRDLGDKL 60
61 LETEREMIRP IGLVDFKNSL VYIKPSVSQD GLVKYEKWAS QFGSSGS
|
| Detection Method: | |
| Confidence: | 438.616428 |
| Match: | 1e32A_ |
| Description: | Membrane fusion atpase p97 N-terminal domain , P97-Nn; Membrane fusion atpase p97, D1 domain; Membrane fusion atpase p97 domain 2, P97-Nc |
| Matching Structure (courtesy of the PDB): |
|
