| Protein: | MIG3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 394 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIG3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..279] | [264..557] |
|
|
0.0 | [1..278] | [406..671] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MNYLRDRFPP DNDQRPFRCE ICSRGFHRLE HKKRHGRTHT GEKPHKCTVQ GCPKSFSRSD 60
61 ELKRHLRTHT KGVQRRRIKS KGSRKTVVNT ATAAPTTFNE NTGVSLTGIG
|
| Detection Method: |  |
| Confidence: | 130.522879 |
| Match: | 1lu6A_ |
| Description: | No description for 1lu6A_ was found. |
|
Region A: Residues: [111-179] |
1 11 21 31 41 51
| | | | | |
1 QSKVPPILIS VAQNCDDVNI RNTGNNNGIV ETQAPAILVP VINIPNDPHP IPSSLSTTSI 60
61 TSIASVYPS
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1bbo__ |
| Description: | Enhancer binding protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-291] |
1 11 21 31 41 51
| | | | | |
1 TSPFQYLKSG FPEDPASTPY VHSSGSSLAL GELSSNSSIF SKSRRNLAAM SGPDSLSSSK 60
61 NQSSASLLSQ TSHPSKSFSR PPTDLSPLRR IMPSVNTGDM EISRTVSVSS SS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.456 | 0.266 | specific transcriptional repressor activity | a.1.1 | Globin-like |
| View | Download | 0.251 | 0.140 | specific transcriptional repressor activity | a.3.1 | Cytochrome c |
| View | Download | 0.406 | 0.047 | specific transcriptional repressor activity | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.291 | 0.005 | specific transcriptional repressor activity | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [292-394] |
1 11 21 31 41 51
| | | | | |
1 SSLTSVTYDD TAAKDMGMGI FFDRPPVTQK ACRSNHKYKV NAVSRGRQHE RAQFHISGDD 60
61 EDSNVHRQES RASNTSPNVS LPPIKSILRQ IDNFNSAPSY FSK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.321 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.504 | b.40.2 | Bacterial enterotoxins |
| View | Download | 0.359 | a.4.12 | TrpR-like |
| View | Download | 0.634 | d.233.1 | Inhibitor of vertebrate lysozyme, Ivy |
| View | Download | 0.297 | d.140.1 | Ribosomal protein S8 |
| View | Download | 0.295 | d.95.2 | Homing endonucleases |
| View | Download | 0.294 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.273 | d.89.1 | Origin of replication-binding domain, RBD-like |
| View | Download | 0.262 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.250 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.246 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.227 | d.95.2 | Homing endonucleases |
| View | Download | 0.217 | d.64.1 | eIF1-like |
| View | Download | 0.206 | d.58.7 | RNA-binding domain, RBD |
