| Protein: | SPC25 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 221 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC25.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-55 | [1..221] | [1..221] |
|
|
1.0E-34 | [2..133] | [218..365] |
|
|
1.0E-34 | [2..156] | [393..546] |
|
|
2.0E-32 | [2..105] | [319..422] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MASIDAFSDL ERRMDGFQKD VAQVLARQQN HARQQLQQFQ AEMRQLHNQH QHLIDELQRL 60
61 ATQRTALQQQ IHAAQQATNT TREQWRSYHE RESELSRRQS TLAAQSRELD SLLQQRGKEC 120
121 VQLRARWAAQ SGNDAAEVAL YERLLQLRVL P
|
| Detection Method: |  |
| Confidence: | 23.0 |
| Match: | 1gk4A_ |
| Description: | Vimentin coil |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [152-221] |
1 11 21 31 41 51
| | | | | |
1 GASDVHDVRF VFGDDSRCWI EVAMHGDHVI GNSHPALDPK SRATLEHVLT VQGDLAAFLV 60
61 VARDMLLASL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
