| Protein: | BIM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 344 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BIM1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..344] | [1..344] |
|
|
0.0 | [6..297] | [16..281] |
|
|
4.0E-99 | [3..283] | [11..257] |
|
|
3.0E-98 | [6..291] | [14..289] |
|
|
2.0E-95 | [3..291] | [11..257] |
|
|
3.0E-93 | [3..291] | [11..294] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MSAGIGESRT ELLTWLNGLL NLNYKKIEEC GTGAAYCQIM DSIYGDLPMN RVKFNATAEY 60
61 EFQTNYKILQ SCFSRHGIEK TVYVDKLIRC KFQDNLEFLQ WLKKHWIRHK DESVYDPDAR 120
121 RK
|
| Detection Method: |  |
| Confidence: | 6.853872 |
| Match: | PF00307 |
| Description: | Calponin homology (CH) domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [123-188] |
1 11 21 31 41 51
| | | | | |
1 YRPIITNNSA TKPRTVSNPT TAKRSSSTGT GSAMSGGLAT RHSSLGINGS RKTSVTQGQL 60
61 VAIQAE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.369 | c.47.1 | Thioredoxin-like |
| View | Download | 0.430 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.262 | d.68.3 | SirA-like |
|
Region A: Residues: [189-344] |
1 11 21 31 41 51
| | | | | |
1 LTKSQETIGS LNEEIEQYKG TVSTLEIERE FYFNKLRDIE ILVHTTQDLI NEGVYKFNDE 60
61 TITGHGNGNG GALLRFVKKV ESILYATAEG FEMNDGEDEL NDKNLGEHGT VPNQGGYANS 120
121 NGEVNGNEGS NHDVIMQNDE GEVGVSNNLI IDEETF
|
| Detection Method: | |
| Confidence: | 24.200659 |
| Match: | PF03271 |
| Description: | EB1-like C-terminal motif |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
