| Protein: | YEL077C |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1277 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
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Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MTLGNSYDAF NHDPWMDVVG FEDPNQVTNR DISRIVLYSY MFLNTAKGCL VEYATFRQYM 60
61 RELPKNAPQK LNFREMRQGL IALGRHCVGS RFETDLYESA TSELMANHSV QT
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| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.742 | N/A | N/A | a.118.19 | Description not found. |
| View | Download | 0.712 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.712 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.710 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.662 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.662 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.662 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.570 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.569 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.566 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
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Region A: Residues: [113-611] |
1 11 21 31 41 51
| | | | | |
1 GRNIYGVDSF SLTSVSGTTA TLLQERASER WIQWLGLESD YHCSFSSTRN AEDVVAGEAA 60
61 SSDHHQKISR VTRKRPREPK STNDILVAGQ KLFGSSFEFR DLHQLRLCYE IYMADTPSVA 120
121 VQAPPGYGKT ELFHLPLIAL ASKGDVKYVS FLFVPYTVLL ANCMIRLGRC GCLNVAPVRN 180
181 FIEEGYDGVT DLYVGIYDDL ASTNFTDRIA AWENIVECTF RTNNVKLGYL IVDEFHNFET 240
241 EVYRQSQFGG ITNLDFDAFE KAIFLSGTAP EAVADAALQR IGLTGLAKKS MDINELKRSE 300
301 DLSRGLSSYP TRMFNLIKEK SEVPLGHVHK IRKKVESQPE EALKLLLALF ESEPESKAIV 360
361 VASTTNEVEE LACSWRKYFR VVWIHGKLDA AEKVSRTKEF VTDGNMRVLI GTKLVTEGID 420
421 IKQLMMVIML DNRLNIIELI QGVGRLRDGG LCYLLSRKNS WAARNRKGEL PPIKEGCITE 480
481 QVREFYGLES KKGKKGQHV
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| Detection Method: | |
| Confidence: | 168.0 |
| Match: | 1fuuA |
| Description: | Initiation factor 4a |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [612-677] |
1 11 21 31 41 51
| | | | | |
1 GCCGSRTDLS ADTVELIERM DRLAEKQATA SMSIVALPSN FQESNSSDRY RKYCSSDEDS 60
61 NTCIHG
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.533 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.476 | g.92.1 | Description not found. |
| View | Download | 0.446 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.446 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.443 | a.43.1 | Met repressor-like |
| View | Download | 0.443 | a.43.1 | Met repressor-like |
| View | Download | 0.438 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.427 | a.4.1 | Homeodomain-like |
| View | Download | 0.427 | a.4.1 | Homeodomain-like |
| View | Download | 0.426 | a.4.5 | "Winged helix" DNA-binding domain |
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Region A: Residues: [678-907] |
1 11 21 31 41 51
| | | | | |
1 SANASTNAST NAITTASTNV RTNATTNAST NATTNASTNA TTNSSTNATT TASTNVRTSA 60
61 TTTASINVRT SATTTESTNS STNATTTASI NVRTSATTTK SINSSTNATI TESTNSNTNA 120
121 TTTESTNSKT SATTTASTNS NTSATTTEST NSKTSATTTA STNSNTSATT TESTNSNTSA 180
181 TTTASTNSST NATTTESTNA SAKEDANKDG NAEDNRFHPV TDINKESYKR
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| Detection Method: | |
| Confidence: | 13.79 |
| Match: | |
| Description: | No description for 1ldvA was found. |
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Region A: Residues: [908-1277] |
1 11 21 31 41 51
| | | | | |
1 KGSQMVLLER KKLKAQFPNT SENMNVLQFL GFRSDEIKHL FLYGIDIYFC PEGVFTQYGL 60
61 CKGCQKMFEL CVCWAGQKVS YRRMAWEALA VERMLRNDEE YKEYLEDIEP YHGDPVGYLK 120
121 YFSVKRREIY SQIQRNYAWY LAITRRRETI SVLDSTRGKQ GSQVFRMSGR QIKELYYKVW 180
181 SNLRESKTEV LQYFLNWDEK KCQEEWEAKD DTVFVEALEK VGVFQRLRSM TSAGLQGPQY 240
241 VKLQFSRHHR QLRSRYELSL GMHLRDQIAL GVTPSKVPHW TAFLSMLIGL FYNKTFRQKL 300
301 EYLLEQISEV WLLPHWLDLA NVEVLAADNT KVPLYMLMVA VHKELDSDDV PDGRFDIILL 360
361 CRDSSREVGE
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
