| Protein: | RIP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 215 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIP1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-58 | [1..215] | [1..215] |
|
|
2.0E-55 | [5..214] | [34..254] |
|
|
3.0E-54 | [5..214] | [52..272] |
|
|
2.0E-53 | [4..214] | [51..272] |
|
|
3.0E-53 | [5..214] | [52..272] |
|
|
6.0E-53 | [2..215] | [43..268] |
|
|
4.0E-52 | [3..215] | [41..265] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MLGIRSSVKT CFKPMSLTSK RLISQSLLAS KSTYRTPNFD DVLKENNDAD KGRSYAYFMV 60
61 GAMGLLSSAG AKSTVETFIS SMTATADV
|
| Detection Method: |  |
| Confidence: | 1149.69897 |
| Match: | 1ezvE_ |
| Description: | ISP subunit of the mitochondrial cytochrome bc1-complex, watersoluble domain; Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquinol-cytochrome-c reductase activity | 12.5243667017255 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 12.5243667017255 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on diphenols and related substances as donors | 9.125468664417 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 6.56410033542443 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 6.40889163290296 | bayes_pls_golite062009 |
| oxidoreductase activity | 6.05060612159037 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 5.79350583896014 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 5.52425708699797 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.31511996363681 | bayes_pls_golite062009 |
| electron carrier activity | 5.20213585732279 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.88364619884033 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 4.66567624087954 | bayes_pls_golite062009 |
| binding | 1.1265044642485 | bayes_pls_golite062009 |
| catalytic activity | 0.746741393172769 | bayes_pls_golite062009 |
| iron-sulfur cluster binding | 0.71220774812099 | bayes_pls_golite062009 |
| metal cluster binding | 0.71220774812099 | bayes_pls_golite062009 |
| protein binding | 0.439276074643623 | bayes_pls_golite062009 |
|
Region A: Residues: [89-215] |
1 11 21 31 41 51
| | | | | |
1 LAMAKVEVNL AAIPLGKNVV VKWQGKPVFI RHRTPHEIQE ANSVDMSALK DPQTDADRVK 60
61 DPQWLIMLGI CTHLGCVPIG EAGDFGGWFC PCHGSHYDIS GRIRKGPAPL NLEIPAYEFD 120
121 GDKVIVG
|
| Detection Method: | |
| Confidence: | 1149.69897 |
| Match: | 1ezvE_ |
| Description: | ISP subunit of the mitochondrial cytochrome bc1-complex, watersoluble domain; Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region |
| Matching Structure (courtesy of the PDB): |
|
