| Protein: | SNF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 633 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNF1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..633] | [1..633] |
|
|
0.0 | [18..633] | [2..611] |
|
|
0.0 | [22..633] | [2..602] |
|
|
0.0 | [5..632] | [2..619] |
|
|
0.0 | [3..632] | [2..618] |
|
|
0.0 | [2..492] | [25..519] |
|
|
0.0 | [2..516] | [20..548] |
|
Region A: Residues: [1-137] |
1 11 21 31 41 51
| | | | | |
1 MSSNNNTNTA PANANSSHHH HHHHHHHHHH GHGGSNSTLN NPKSSLADGA HIGNYQIVKT 60
61 LGEGSFGKVK LAYHTTTGQK VALKIINKKV LAKSDMQGRI EREISYLRLL RHPHIIKLYD 120
121 VIKSKDEIIM VIEYAGN
|
|
Region B: Residues: [330-337] |
1 11 21 31 41 51
| | | | | |
1 NDSKKDGS
|
| Detection Method: |  |
| Confidence: | 525.373389 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [138-329] |
1 11 21 31 41 51
| | | | | |
1 ELFDYIVQRD KMSEQEARRF FQQIISAVEY CHRHKIVHRD LKPENLLLDE HLNVKIADFG 60
61 LSNIMTDGNF LKTSCGSPNY AAPEVISGKL YAGPEVDVWS CGVILYVMLC RRLPFDDESI 120
121 PVLFKNISNG VYTLPKFLSP GAAGLIKRML IVNPLNRISI HEIMQDDWFK VDLPEYLLPP 180
181 DLKPHPEEEN EN
|
| Detection Method: | |
| Confidence: | 525.373389 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [338-420] |
1 11 21 31 41 51
| | | | | |
1 SPDNDEIDDN LVNILSSTMG YEKDEIYESL ESSEDTPAFN EIRDAYMLIK ENKSLIKDMK 60
61 ANKSVSDELD TFLSQSPPTF QQQ
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 1ahr__ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [421-499] |
1 11 21 31 41 51
| | | | | |
1 SKSHQKSQVD HETAKQHARR MASAITQQRT YHQSPFMDQY KEEDSTVSIL PTSLPQIHRA 60
61 NMLAQGSPAA SKISPLVTK
|
| Detection Method: | |
| Confidence: | 12.221849 |
| Match: | 1ahr__ |
| Description: | Calmodulin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [500-633] |
1 11 21 31 41 51
| | | | | |
1 KSKTRWHFGI RSRSYPLDVM GEIYIALKNL GAEWAKPSEE DLWTIKLRWK YDIGNKTNTN 60
61 EKIPDLMKMV IQLFQIETNN YLVDFKFDGW ESSYGDDTTV SNISEDEMST FSAYPFLHLT 120
121 TKLIMELAVN SQSN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
