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View Structure Prediction Details

Protein: UGO1
Organism: Saccharomyces cerevisiae
Length: 502 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UGO1.

Description E-value Query
Range
Subject
Range
UGO1 - Protein of unknown function; outer membrane component of the mitochondrial fusion machinery; Ugo1p b...
2.0E-73 [1..502] [1..502]
SLC25A24 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
gi|190691843, gi... - gi|190691843|gb|ACE87696.1| solute carrier family 25 (mitochondrial carrier; phosphate carrier), mem...
2.0E-61 [174..497] [184..470]
SCM1B_XENLA - Calcium-binding mitochondrial carrier protein SCaMC-1-B OS=Xenopus laevis GN=slc25a24-b PE=2 SV=1
3.0E-60 [174..499] [184..471]
SCMC1_MOUSE - Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=1 SV=1
6.0E-60 [174..497] [184..468]
ADT3_BOVIN - ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=1 SV=3
1.0E-59 [180..497] [4..296]
gi|45360469, gi|... - gi|89271383|emb|CAJ82932.1| slc25a5 [Xenopus tropicalis], gi|89268733|emb|CAJ82402.1| slc25a5 [Xenop...
2.0E-59 [183..498] [7..297]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNNNVTEAT SRAQIRPYYD PDSFNAGYSA VFKPDEGVVD PHGYTIASKL NVINSSPTTK  60
   61 RMANALFKSS PMKKLSNSVN DGLSLEGSNG EITGLNNFEW AELVNIQKWR KIFGQLLDMF 120
  121 FRKYFQLLIQ QPFDVARLLI QVGEFKIFKT TVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNKPQAPIIL RDEEGDGAAR EGEEDAYDEE EIDFFPIERK IAEANSTAPI MAEETDHSHH  60
   61 EPTDISLTIA PQSLHTIDVI NALFDQEGIR GLWKANNTTF IYNFLSLSID TWFTGLLSSF 120
  121 LGVPDPYFME VINSPDISKS FILALGAGVF TSIILLPVDL IRTRLIVTSF KKKKNVKTDG 180
  181 KNMVTNTRSL RQLIRCWSWR KNGVSIPLDM WSLTILQSIN NSFFNKLFDL VIYNQFHIEK 240
  241 YSQTVMYNTM KFFSKSLELF IKLPLENLLR RCQLNYLLND QRLSFKVDST ELIVKPKKYN 300
  301 GIWDVIRNNS NTNRGQLWNG WKVGVISLIC GYGLQMMNKV DINMEQEKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.522879
Match: 1okcA_
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle