| Protein: | YHP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 353 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHP1.
| Description | E-value | Query Range |
Subject Range |
|
|
207.0 | [0..115] | [350..32] |
|
|
206.0 | [0..74] | [337..4] |
|
|
206.0 | [0..63] | [315..22] |
|
|
206.0 | [0..140] | [337..69] |
|
|
200.0 | [0..88] | [341..20] |
|
Region A: Residues: [1-157] |
1 11 21 31 41 51
| | | | | |
1 MESRNTVLPS LPNIITGTSN SPFQLHTLPN TNFPSDDQGD IRLPPLAASA HIVRPVVNIY 60
61 KSPCDEERPK RKSPQAVDFL SQRVTTSMTP LSKPKKLSSH SPFTPTVRVC SKEQPPQSMH 120
121 SYKKVNILTP LSAAKAVLTP TTRKEKKRSF AFITHSQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [158-242] |
1 11 21 31 41 51
| | | | | |
1 ETFPKKEPKI DNARLARRKR RRTSSYELGI LQTAFDECPT PNKAKRIELS EQCNMSEKSV 60
61 QIWFQNKRQA AKKHKNSGNT SHCKV
|
| Detection Method: | |
| Confidence: | 77.502279 |
| Match: | 1fjlA |
| Description: | Paired protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [243-353] |
1 11 21 31 41 51
| | | | | |
1 HSNDSMSMIS YSDAALEITS TPTSTKEAIT AELLKTSPAN TSSIFEDHHI TPCKPGGQLK 60
61 FHRKSVLVKR TLSNTGHSEI IKSPKGKENR LKFNAYERKP LGEVDLNSFK N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.457 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.445 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.391 | N/A | N/A | d.15.2 | CAD & PB1 domains |
| View | Download | 0.380 | N/A | N/A | d.15.11 | Doublecortin (DC) |
| View | Download | 0.380 | N/A | N/A | d.15.11 | Doublecortin (DC) |
| View | Download | 0.377 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.377 | N/A | N/A | d.15.1 | Ubiquitin-like |
| View | Download | 0.355 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.348 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.296 | N/A | N/A | a.39.1 | EF-hand |
