| Protein: | UTP6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 440 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UTP6.
| Description | E-value | Query Range |
Subject Range |
|
|
479.0 | [0..1] | [440..1] |
|
|
301.0 | [0..6] | [440..7] |
|
|
294.0 | [0..3] | [440..4] |
|
|
291.0 | [0..6] | [440..7] |
|
|
188.0 | [0..2] | [433..3] |
|
|
180.0 | [0..1] | [279..652] |
|
|
178.0 | [0..1] | [279..596] |
|
|
177.0 | [0..1] | [279..593] |
|
|
177.0 | [0..1] | [279..593] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MSKTRYYLEQ CIPEMDDLVE KGLFTKNEVS LIMKKRTDFE HRLNSRGSSI NDYIKYINYE 60
61 SNVN
|
| Detection Method: |  |
| Confidence: | 13.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [65-124] |
1 11 21 31 41 51
| | | | | |
1 KLRAKRCKRI LQVKKTNSLS DWSIQQRIGF IYQRGTNKFP QDLKFWAMYL NYMKARGNQT 60
61
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [125-221] |
1 11 21 31 41 51
| | | | | |
1 SYKKIHNIYN QLLKLHPTNV DIWISCAKYE YEVHANFKSC RNIFQNGLRF NPDVPKLWYE 60
61 YVKFELNFIT KLINRRKVMG LINEREQELD MQNEQKN
|
| Detection Method: | |
| Confidence: | 13.0 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [222-289] |
1 11 21 31 41 51
| | | | | |
1 NQAPDEEKSH LQVPSTGDSM KDKLNELPEA DISVLGNAET NPALRGDIAL TIFDVCMKTL 60
61 GKHYINKH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.828 | a.60.12 | DNA polymerase beta-like, second domain |
|
Region A: Residues: [290-440] |
1 11 21 31 41 51
| | | | | |
1 KGYYAISDSK MNIELNKETL NYLFSESLRY IKLFDEFLDL ERDYLINHVL QFWKNDMYDL 60
61 SLRKDLPELY LKTVMIDITL NIRYMPVEKL DIDQLQLSVK KYFAYISKLD SASVKSLKNE 120
121 YRSYLQDNYL KKMNAEDDPR YKILDLIISK L
|
| Detection Method: | |
| Confidence: | 3.54 |
| Match: | |
| Description: | No description for 1bn6A was found. |
