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View Structure Prediction Details

Protein: THI74
Organism: Saccharomyces cerevisiae
Length: 370 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for THI74.

Description E-value Query
Range
Subject
Range
WAT1_ARATH - Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1
1.0E-35 [57..363] [22..353]
gi|14090211, gi|... - gi|34895316|ref|NP_909001.1| putative nodulin-like protein 5NG4 [Oryza sativa (japonica cultivar-gro...
2.0E-35 [55..368] [17..344]
YMB8_YEAST - Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / ...
YML018C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
7.0E-33 [7..348] [10..366]
gi|2598575 - gi|2598575|emb|CAA75575.1| MtN21 [Medicago truncatula]
7.0E-33 [47..367] [11..350]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRVGIDVDH MIGVLLLAVV VVFWVGASCL TNELLETNAY NKPFFLTYLN ISSFALYLTP  60
   61 DLWRIIQSRR KSLQERTERT LPIHTQESFS EFLPLLSSTP STSSNLSSIA DTKVKDTMRL 120
  121 SLLFCVLWFV ANLAANAALS YTTVASSTIL SSTSSFFTLF LATSLGIETF STKKLLGLFV 180
  181 SLFGIILIVM QSSKQQDSV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 2.327902
Match: PF00892
Description: Integral membrane protein DUF6

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SASSFLVGNT LALLGSLGYS VYTTLLKYEI SSKGLRLDIQ MFLGYVGIFT FLLFWPILII  60
   61 LDITHMETFE LPSNFHISFL VMLNCIIIFV SDYFWCKALI LTSPLVVTVA LTFTIPLAMF 120
  121 ADFVWREAFF TPWYIIGVIF IFVSFFLVNH RGESAVEKDC AAVEKGPILD A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [202-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSFLVGNTLA LLGSLGYSVY TTLLKYEISS KGLRLDIQMF LGYVGIFTFL LFWPILIILD  60
   61 ITHMETFELP SNFHISFLVM LNCIIIFVSD YFWCKALILT SPLVVTVALT FTIPLAMFAD 120
  121 FVWREAFFTP WYIIGVIFIF VSFFLVNHRG ESAVEKDCAA VEKGPILDA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle