YRC Public Data Repository - Protein Structure Prediction

Protein:	GPI19
Organism:	Saccharomyces cerevisiae
Length:	140 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPI19.

Description	E-value	Query Range	Subject Range
GPI19_YEAST - Phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI19 OS=Saccharomyces cerevisiae (stra... GPI19 - Subunit of GPI-GlcNAc transferase involved in synthesis of N-acetylglucosaminyl phosphatidylinositol...	4.0E-46	[1..140]	[1..140]
PIGP_ARATH - Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Arabidopsis thaliana GN=At1g61280 ...	5.0E-35	[3..131]	[13..131]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	8.0E-35	[7..132]	[39..149]
PIGP - phosphatidylinositol glycan anchor biosynthesis, class P	1.0E-34	[7..132]	[39..149]
PIGP_MOUSE - Phosphatidylinositol N-acetylglucosaminyltransferase subunit P OS=Mus musculus GN=Pigp PE=2 SV=1	5.0E-34	[7..132]	[15..125]
MUG84_SCHPO - Meiotically up-regulated gene 84 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=m... mug84 - pig-P	1.0E-27	[3..103]	[6..99]

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Predicted Domain #1

Region A:
Residues: [1-140]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTKEYYWFS QYMIITSTLV LTIIWSILPS SLGEAAPKQF INTLLDIFPQ RRWIITLESI  60
   61 MLMGMLCTYI GLLMYNEDTL TPPLDSLSTV TDAGGQLVIE DDPDVFVKKW AFKETSGIYD 120
  121 LSLMDACQLL YLYDNDHTST

[Run NCBI BLAST on this sequence.]

Detection Method:	Pcons
Confidence:	1.88
Match:	1fnuA
Description:	Streptococcal pyrogenic exotoxin A1
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits