| Protein: | MSN5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1224 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSN5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1137] | [3..1126] |
|
|
0.0 | [1..1224] | [1..1224] |
|
|
0.0 | [1..1137] | [3..1126] |
|
|
0.0 | [3..1130] | [8..1150] |
|
|
0.0 | [457..1137] | [2..677] |
|
Region A: Residues: [1-253] |
1 11 21 31 41 51
| | | | | |
1 MDSTGASQIV SALDVIYSPK SNNSQRQEAQ KFLDEVKLCS ESPFWGYEIA LQNPTNSILK 60
61 YFGLGLLDHA VKKNWNDYDE GKRVALRKWV MELNFGVQDY DTRYIKEKLA TLWVEVAKRT 120
121 WGEALKQTNP TEEQLLTSWV DMDNNLFELW NINQSSRELA LIIFRILFED VFLLDDLIVL 180
181 KRMTVIQPLC VMIVCPIEVF AIKYKFSDKW TKFKANEEGW FSVWIPELNN ALQQNNSEYI 240
241 IRLLETLKTC LNW
|
| Detection Method: |  |
| Confidence: | 3.522879 |
| Match: | 1ibrB_ |
| Description: | Importin beta |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [254-393] |
1 11 21 31 41 51
| | | | | |
1 PLTEVIVRND VLSSLLTCLS SNIPRAQSMA LDSIHILLTR PYSNESHYQM TIDRVFDNMD 60
61 LLDSVYESLL FDPTDDIDET KYPIIKKFVD MISCLYVCVP KIKETNGQIQ KYFKLVLKTT 120
121 YNPSLIVSGL TLDLWCTCLR
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.471 | 0.469 | protein export from nucleus | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.428 | 0.006 | protein export from nucleus | b.91.1 | E2 regulatory, transactivation domain |
| View | Download | 0.381 | 0.005 | protein export from nucleus | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.403 | 0.004 | protein export from nucleus | a.63.1 | Apolipophorin-III |
| View | Download | 0.471 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.446 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.446 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.428 | N/A | N/A | b.91.1 | E2 regulatory, transactivation domain |
| View | Download | 0.403 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.381 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.368 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.362 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.329 | N/A | N/A | a.79.1 | Antitermination factor NusB |
| View | Download | 0.328 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.328 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.325 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.324 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.285 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.281 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.272 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.272 | N/A | N/A | a.116.1 | GTPase activation domain, GAP |
| View | Download | 0.268 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.256 | N/A | N/A | a.158.1 | F-box domain |
| View | Download | 0.252 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.246 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.245 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.239 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.239 | N/A | N/A | d.15.4 | 2Fe-2S ferredoxin-like |
| View | Download | 0.238 | N/A | N/A | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.236 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.230 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.227 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.226 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.222 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.219 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.218 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.218 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.215 | N/A | N/A | a.146.1 | Telomeric repeat binding factor (TRF) dimerisation domain |
| View | Download | 0.215 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.212 | N/A | N/A | d.224.1 | SufE-like |
| View | Download | 0.211 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.209 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.208 | N/A | N/A | d.127.1 | Creatinase/aminopeptidase |
| View | Download | 0.205 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.204 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.203 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.202 | N/A | N/A | a.118.9 | ENTH/VHS domain |
|
Region A: Residues: [394-481] |
1 11 21 31 41 51
| | | | | |
1 NDEYLPKLEK YVIPDLLQFA ADALVYYEQI DGHISKKFAE IDFQSKSEFQ TFCSTYRKRI 60
61 RDIIRLISCV ELDLTYDWLN NRLNNYFS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.725 | 0.026 | protein export from nucleus | a.64.1 | Saposin |
| View | Download | 0.700 | 0.025 | protein export from nucleus | a.47.2 | t-snare proteins |
| View | Download | 0.897 | 0.005 | protein export from nucleus | a.46.1 | Methionine synthase domain |
| View | Download | 0.654 | 0.004 | protein export from nucleus | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.897 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.767 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.725 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.705 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.700 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.632 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.614 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.588 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.579 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.558 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.523 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.522 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.507 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.502 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.479 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.444 | N/A | N/A | a.4.11 | RNA polymerase subunit RPB10 |
| View | Download | 0.435 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.427 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.426 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.422 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.415 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.412 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.408 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.385 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.385 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.381 | N/A | N/A | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.380 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.380 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.377 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.371 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.370 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.369 | N/A | N/A | d.95.2 | Homing endonucleases |
| View | Download | 0.357 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.347 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.342 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.335 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.330 | N/A | N/A | a.17.1 | p8-MTCP1 |
| View | Download | 0.327 | N/A | N/A | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.326 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.326 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.323 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.322 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.321 | N/A | N/A | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.318 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.317 | N/A | N/A | d.26.1 | FKBP-like |
| View | Download | 0.317 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.312 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.311 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.311 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.310 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.306 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.304 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.299 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.293 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.291 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.284 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.279 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.278 | N/A | N/A | a.65.1 | Annexin |
| View | Download | 0.276 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.272 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.271 | N/A | N/A | a.145.1 | Flagellar transcriptional activator FlhD |
| View | Download | 0.271 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.271 | N/A | N/A | d.13.1 | HIT-like |
| View | Download | 0.271 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.269 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.266 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.263 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.260 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.257 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.252 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.250 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.241 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.240 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.238 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.237 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.236 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.236 | N/A | N/A | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.235 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.228 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.224 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.224 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.223 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.220 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.219 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.219 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.218 | N/A | N/A | f.17.2 | Cytochrome c oxidase subunit II-like, transmembrane region |
| View | Download | 0.217 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.217 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.216 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.212 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.208 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.208 | N/A | N/A | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.202 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.202 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.201 | N/A | N/A | a.30.1 | ROP protein |
| View | Download | 0.201 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.201 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
|
Region A: Residues: [482-647] |
1 11 21 31 41 51
| | | | | |
1 SPFGQQVLSS TFLDHKLEPY LGALSQYMIV ECFINGCIRW KIWYPTGDDY DEKLDSILQK 60
61 LEILSNQLIA LNLREPLLLK KQIQNFALFL TMLKDNVLFT LLEKIITSAT MDYPEINLEE 120
121 RGAESDAVRD LRYACGIELN RMALLMPESL KKIYPDLESV IARIMP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.631 | 0.203 | protein export from nucleus | a.1.1 | Globin-like |
| View | Download | 0.593 | 0.133 | protein export from nucleus | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.529 | 0.017 | protein export from nucleus | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.862 | 0.016 | protein export from nucleus | a.7.7 | BAG domain |
| View | Download | 0.862 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.631 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.593 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.544 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.529 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.525 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.473 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.413 | N/A | N/A | d.92.1 | Metalloproteases ("zincins"), catalytic domain |
| View | Download | 0.410 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.380 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.353 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.334 | N/A | N/A | a.111.1 | Acid phosphatase/Vanadium-dependent haloperoxidase |
| View | Download | 0.332 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.320 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.309 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.303 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.299 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.295 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.294 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.292 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.291 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.283 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.277 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.272 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.259 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.251 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.250 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.250 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.249 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.247 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.236 | N/A | N/A | d.91.1 | N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 |
| View | Download | 0.235 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.233 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.231 | N/A | N/A | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.230 | N/A | N/A | d.127.1 | Creatinase/aminopeptidase |
| View | Download | 0.228 | N/A | N/A | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.228 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.227 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.224 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.215 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.214 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.213 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.211 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.210 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.206 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.204 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.201 | N/A | N/A | a.25.1 | Ferritin-like |
|
Region A: Residues: [648-1131] |
1 11 21 31 41 51
| | | | | |
1 NLSYHEKISF KSFLLIIVLK SSLDMKEERF AAIVDPELLA WSDKTTVVGL SDLHWFMERL 60
61 GIVQIAEYFQ RRDIDENSDL LSIPIDDEGK ELKSELTKRW QSLFPVRATR MFIHYSMQSI 120
121 KTDEEFKMLQ DLWRPRIVPI LPYITRLLYQ LQSYHDPDNW KGLPTVVQSF VKYSTIERFW 180
181 EAGASNKSKD EFIDEHMKAM QTLRDFADSV GHIIRYTREY TLLVLSAISS LGSVFYLLDE 240
241 SPDLLLNSIA IFKPGSNEIS PGVSTHGWKH IMNIAIRPIL KGCPKDCLGK FMPAFLPKLF 300
301 EILDLLLCQK WSSHMNDMDM NPVPTDDDQM TEEILEENLL RQLTTVVVRI VIDCVGQGNA 360
361 NPNSAKSRLN NHQMEMRKII FNDLNTLAPF LKLLNHLISF KDTKCSFNSI LVMKCCLTSV 420
421 LNQNNTVDEY FTFEVMKNLL LNVLCNSAFK DSFHEALYAF TVIFLTLCKE YPSARAFLFE 480
481 ISNG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1132-1224] |
1 11 21 31 41 51
| | | | | |
1 YNIDELYRNL RSVDEYKTQR ALMIDFIDWV KSTSGKEDGN VDHAGDERKR QEKREAILKK 60
61 ANERLIKKNK ENGDMLDDPN IEDGAVGNLF DDN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.474 | 0.110 | protein export from nucleus | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.535 | 0.108 | protein export from nucleus | a.26.1 | 4-helical cytokines |
| View | Download | 0.670 | 0.031 | protein export from nucleus | a.74.1 | Cyclin-like |
| View | Download | 0.447 | 0.019 | protein export from nucleus | a.24.3 | Cytochromes |
| View | Download | 0.775 | 0.007 | protein export from nucleus | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.423 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.391 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.375 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.362 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.344 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.344 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.337 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.336 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.334 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.329 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.298 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.296 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.293 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.289 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.284 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.279 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.278 | N/A | N/A | a.2.11 | Fe,Mn superoxide dismutase (SOD), N-terminal domain |
| View | Download | 0.274 | N/A | N/A | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.268 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.266 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.264 | N/A | N/A | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.264 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.260 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.253 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.249 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.247 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.246 | N/A | N/A | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.246 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.243 | N/A | N/A | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.241 | N/A | N/A | d.58.48 | MTH1187-like |
| View | Download | 0.233 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.228 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.226 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.224 | N/A | N/A | a.2.3 | Chaperone J-domain |
| View | Download | 0.223 | N/A | N/A | f.16.1 | Gated mechanosensitive channel |
| View | Download | 0.221 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.220 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.215 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.214 | N/A | N/A | d.53.1 | Ribosomal protein S3 C-terminal domain |
| View | Download | 0.207 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.206 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.203 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.201 | N/A | N/A | a.66.1 | Transducin (alpha subunit), insertion domain |
|
Region A: Residues: [906-968] |
1 11 21 31 41 51
| | | | | |
1 ISPGVSTHGW KHIMNIAIRP ILKGCPKDCL GKFMPAFLPK LFEILDLLLC QKWSSHMNDM 60
61 DMN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [969-1147] |
1 11 21 31 41 51
| | | | | |
1 PVPTDDDQMT EEILEENLLR QLTTVVVRIV IDCVGQGNAN PNSAKSRLNN HQMEMRKIIF 60
61 NDLNTLAPFL KLLNHLISFK DTKCSFNSIL VMKCCLTSVL NQNNTVDEYF TFEVMKNLLL 120
121 NVLCNSAFKD SFHEALYAFT VIFLTLCKEY PSARAFLFEI SNGYNIDELY RNLRSVDEY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1148-1224] |
1 11 21 31 41 51
| | | | | |
1 KTQRALMIDF IDWVKSTSGK EDGNVDHAGD ERKRQEKREA ILKKANERLI KKNKENGDML 60
61 DDPNIEDGAV GNLFDDN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.775 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.670 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.535 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.474 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.447 | N/A | N/A | a.24.3 | Cytochromes |
