YRC Public Data Repository - Protein Structure Prediction

Protein:	YDR286C
Organism:	Saccharomyces cerevisiae
Length:	114 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR286C.

Description	E-value	Query Range	Subject Range
gi\|151942259 - gi\|151942259\|gb\|EDN60615.1\| conserved protein [Saccharomyces cerevisiae YJM789] YDR286C - Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site YD286_YEAST - Glutaredoxin-like protein YDR286C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR286... gi\|190404770 - gi\|190404770\|gb\|EDV08037.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]	3.0E-50	[1..114]	[1..114]
gi\|17135484, gi\|... - gi\|17229156\|ref\|NP_485704.1\| hypothetical protein asl1664 [Nostoc sp. PCC 7120], gi\|17135484\|dbj\|BAB... gi\|25529839 - pir\|\|AB2014 hypothetical protein asl1664 [imported] - Nostoc sp. (strain PCC 7120)	1.0E-19	[21..90]	[1..62]
YD286_MOUSE - Glutaredoxin-like protein C5orf63 homolog OS=Mus musculus PE=1 SV=1	5.0E-18	[23..83]	[32..85]
gi\|14190427, gi\|... - gi\|18413101\|ref\|NP_567336.1\| unknown protein [Arabidopsis thaliana], gi\|15215897\|gb\|AAK91492.1\| AT4g...	2.0E-17	[22..81]	[34..93]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	2.0E-17	[22..81]	[42..101]
gi\|7470661 - pir\|\|S75571 hypothetical protein ssr1391 - Synechocystis sp. (strain PCC 6803) gi\|1653216, gi\|1... - gi\|1653216\|dbj\|BAA18132.1\| ssr1391 [Synechocystis sp. PCC 6803], gi\|16330724\|ref\|NP_441452.1\| hypoth...	6.0E-16	[21..81]	[8..60]
gi\|19528013 - gi\|19528013\|gb\|AAL90121.1\| AT20781p [Drosophila melanogaster]	8.0E-15	[23..81]	[314..366]
gi\|10176186, gi\|... - gi\|15616124\|ref\|NP_244429.1\| hypothetical protein BH3562 [Bacillus halodurans C-125], gi\|10176186\|db... gi\|25490968 - pir\|\|B84095 hypothetical protein BH3562 [imported] - Bacillus halodurans (strain C-125)	0.003	[21..83]	[2..57]
gi\|17545778 - gi\|17545778\|ref\|NP_519180.1\| hypothetical protein RSc1059 [Ralstonia solanacearum GMI1000] gi\|17428072 - gi\|17428072\|emb\|CAD14761.1\| conserved hypothetical protein [Ralstonia solanacearum GMI1000]	0.004	[21..100]	[2..76]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAFRCSIH TSRVLLHDAG VKLTFFSKPN CGLCDQAKEV IDDVFERKEF HNKAVSLEIV  60
   61 NITDRRNAKW WKEYCFDIPV LHIEKVGDPK SCTKILHFLE EDDISDKIRR MQSR

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.865	c.47.1	Thioredoxin-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits