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View Structure Prediction Details

Protein: YDR286C
Organism: Saccharomyces cerevisiae
Length: 114 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR286C.

Description E-value Query
Range
Subject
Range
gi|151942259 - gi|151942259|gb|EDN60615.1| conserved protein [Saccharomyces cerevisiae YJM789]
YDR286C - Putative protein of unknown function; predicted to have thiol-disulfide oxidoreductase active site
YD286_YEAST - Glutaredoxin-like protein YDR286C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR286...
gi|190404770 - gi|190404770|gb|EDV08037.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
3.0E-50 [1..114] [1..114]
gi|17135484, gi|... - gi|17229156|ref|NP_485704.1| hypothetical protein asl1664 [Nostoc sp. PCC 7120], gi|17135484|dbj|BAB...
gi|25529839 - pir||AB2014 hypothetical protein asl1664 [imported] - Nostoc sp. (strain PCC 7120)
1.0E-19 [21..90] [1..62]
YD286_MOUSE - Glutaredoxin-like protein C5orf63 homolog OS=Mus musculus PE=1 SV=1
5.0E-18 [23..83] [32..85]
gi|14190427, gi|... - gi|18413101|ref|NP_567336.1| unknown protein [Arabidopsis thaliana], gi|15215897|gb|AAK91492.1| AT4g...
2.0E-17 [22..81] [34..93]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-17 [22..81] [42..101]
gi|7470661 - pir||S75571 hypothetical protein ssr1391 - Synechocystis sp. (strain PCC 6803)
gi|1653216, gi|1... - gi|1653216|dbj|BAA18132.1| ssr1391 [Synechocystis sp. PCC 6803], gi|16330724|ref|NP_441452.1| hypoth...
6.0E-16 [21..81] [8..60]
gi|19528013 - gi|19528013|gb|AAL90121.1| AT20781p [Drosophila melanogaster]
8.0E-15 [23..81] [314..366]
gi|10176186, gi|... - gi|15616124|ref|NP_244429.1| hypothetical protein BH3562 [Bacillus halodurans C-125], gi|10176186|db...
gi|25490968 - pir||B84095 hypothetical protein BH3562 [imported] - Bacillus halodurans (strain C-125)
0.003 [21..83] [2..57]
gi|17545778 - gi|17545778|ref|NP_519180.1| hypothetical protein RSc1059 [Ralstonia solanacearum GMI1000]
gi|17428072 - gi|17428072|emb|CAD14761.1| conserved hypothetical protein [Ralstonia solanacearum GMI1000]
0.004 [21..100] [2..76]

Back

Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAFRCSIH TSRVLLHDAG VKLTFFSKPN CGLCDQAKEV IDDVFERKEF HNKAVSLEIV  60
   61 NITDRRNAKW WKEYCFDIPV LHIEKVGDPK SCTKILHFLE EDDISDKIRR MQSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.865 c.47.1 Thioredoxin-like
View Download 0.795 c.47.1 Thioredoxin-like
View Download 0.689 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.686 c.23.6 Cobalamin (vitamin B12)-binding domain
View Download 0.679 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.675 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.673 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.664 d.68.4 YhbY-like
View Download 0.663 d.92.2 beta-N-acetylhexosaminidase-like domain
View Download 0.651 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.624 c.20.1 Initiation factor IF2/eIF5b, domain 3
View Download 0.596 c.84.1 Phosphoglucomutase, first 3 domains
View Download 0.590 c.30.1 PreATP-grasp domain
View Download 0.586 c.115.1 Hypothetical protein MTH777 (MT0777)
View Download 0.567 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.550 c.47.1 Thioredoxin-like
View Download 0.511 d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.499 d.68.6 DNA-binding protein Sso10b (AlbA)
View Download 0.494 c.13.2 Anti-sigma factor antagonist SpoIIaa
View Download 0.485 c.23.3 Hypothetical protein MTH538
View Download 0.482 c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.469 c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.467 c.36.1 Thiamin diphosphate-binding fold (THDP-binding)
View Download 0.444 c.54.1 IIA domain of mannose transporter, IIA-Man
View Download 0.443 c.47.1 Thioredoxin-like
View Download 0.442 c.23.16 Class I glutamine amidotransferase-like
View Download 0.441 c.47.1 Thioredoxin-like
View Download 0.438 c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.435 c.48.1 TK C-terminal domain-like
View Download 0.430 d.81.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
View Download 0.422 c.23.1 CheY-like
View Download 0.415 d.81.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
View Download 0.410 c.26.2 Adenine nucleotide alpha hydrolases-like
View Download 0.409 c.47.2 RNA 3'-terminal phosphate cyclase, RPTC, insert domain
View Download 0.406 c.59.1 MurD-like peptide ligases, peptide-binding domain
View Download 0.402 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.397 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.397 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.396 a.71.2 Helical domain of Sec23/24
View Download 0.393 c.52.2 tRNA splicing endonuclease, C-terminal domain
View Download 0.389 c.47.1 Thioredoxin-like
View Download 0.383 c.23.1 CheY-like
View Download 0.382 c.26.1 Nucleotidylyl transferase
View Download 0.377 c.44.2 Enzyme IIB-cellobiose
View Download 0.376 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.370 c.3.1 FAD/NAD(P)-binding domain
View Download 0.366 c.30.1 PreATP-grasp domain
View Download 0.366 d.204.1 Ribosome binding protein Y (YfiA homologue)
View Download 0.365 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.361 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.351 c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.346 c.48.1 TK C-terminal domain-like
View Download 0.343 c.23.1 CheY-like
View Download 0.342 c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.341 c.95.1 Thiolase-like
View Download 0.337 d.79.1 YjgF-like
View Download 0.326 d.136.1 Phospholipase D/nuclease
View Download 0.324 c.3.1 FAD/NAD(P)-binding domain
View Download 0.324 d.199.1 DNA-binding C-terminal domain of the transcription factor MotA
View Download 0.323 c.78.1 Aspartate/ornithine carbamoyltransferase
View Download 0.317 c.59.1 MurD-like peptide ligases, peptide-binding domain
View Download 0.315 g.45.1 Pyk2-associated protein beta ARF-GAP domain
View Download 0.314 c.37.1 P-loop containing nucleoside triphosphate hydrolases
View Download 0.312 d.44.1 Fe,Mn superoxide dismutase (SOD), C-terminal domain
View Download 0.311 d.58.14 Ribosomal protein S6
View Download 0.306 c.47.1 Thioredoxin-like
View Download 0.304 d.79.3 L30e-like
View Download 0.303 c.16.1 Lumazine synthase
View Download 0.302 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.300 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.295 c.78.1 Aspartate/ornithine carbamoyltransferase
View Download 0.288 c.78.1 Aspartate/ornithine carbamoyltransferase
View Download 0.288 d.74.3 RBP11-like subunits of RNA polymerase
View Download 0.286 c.23.12 Formate/glycerate dehydrogenase catalytic domain-like
View Download 0.282 c.24.1 Methylglyoxal synthase-like
View Download 0.281 c.23.13 Type II 3-dehydroquinate dehydratase
View Download 0.280 d.79.1 YjgF-like
View Download 0.278 c.2.1 NAD(P)-binding Rossmann-fold domains
View Download 0.277 c.23.10 SGHN hydrolase
View Download 0.277 c.26.3 UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
View Download 0.275 c.26.2 Adenine nucleotide alpha hydrolases-like
View Download 0.268 c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.267 c.15.1 BRCT domain
View Download 0.264 d.74.3 RBP11-like subunits of RNA polymerase
View Download 0.262 c.47.1 Thioredoxin-like
View Download 0.251 d.79.5 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF
View Download 0.246 c.23.4 Succinyl-CoA synthetase domains
View Download 0.243 c.5.1 MurCD N-terminal domain
View Download 0.242 c.61.1 PRTase-like
View Download 0.237 c.23.5 Flavoproteins
View Download 0.236 a.24.16 Nucleotidyltransferase substrate binding subunit/domain
View Download 0.233 c.58.1 Aminoacid dehydrogenase-like, N-terminal domain
View Download 0.224 c.32.1 Tubulin/Dihydroxyacetone kinase nucleotide-binding domain
View Download 0.223 c.26.1 Nucleotidylyl transferase
View Download 0.217 a.39.2 Insect pheromon/odorant-binding proteins
View Download 0.215 c.49.1 Pyruvate kinase, C-terminal domain
View Download 0.210 c.23.6 Cobalamin (vitamin B12)-binding domain
View Download 0.209 c.121.1 Ribose/Galactose isomerase RpiB/AlsB
View Download 0.202 c.15.1 BRCT domain
View Download 0.202 d.49.1 Signal recognition particle alu RNA binding heterodimer, SRP9/14


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle