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View Structure Prediction Details

Protein: SWM1
Organism: Saccharomyces cerevisiae
Length: 170 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWM1.

Description E-value Query
Range
Subject
Range
SWM1_YEAST - Anaphase-promoting complex subunit SWM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
SWM1 - Subunit of the anaphase-promoting complex, which is an E3 ubiquitin ligase that regulates the metaph...
gi|207346526 - gi|207346526|gb|EDZ72999.1| YDR260Cp-like protein [Saccharomyces cerevisiae AWRI1631]
9.0E-96 [1..170] [1..170]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSYRDSY FQYRHLPAPH HILYAEWNQD ILALPDEVAN ITMAMKDNTR TDAEEGRAPQ  60
   61 DGERNSNVRE SAQGKALMTS EQNSNRYWNS FHDEDDWNLF NGMELESNGV VTFAGQAFDH 120
  121 SLNGGTNSRN DGANEPRKET ITGSIFDRRI TQLAYARNNG WHELALPQSR 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle