| Protein: | RKM4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 494 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RKM4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..494] | [1..494] |
|
|
3.0E-88 | [3..451] | [5..412] |
|
|
3.0E-84 | [4..405] | [50..404] |
|
|
1.0E-76 | [3..405] | [51..406] |
|
|
8.0E-75 | [5..405] | [54..407] |
|
|
8.0E-64 | [13..326] | [38..329] |
|
Region A: Residues: [1-281] |
1 11 21 31 41 51
| | | | | |
1 MDDFSRDTEN FVCWLKTTAE IEVSPKIEIK DLCCDNQGRA VVATQKIKKD ETLFKIPRSS 60
61 VLSVTTSQLI KDYPSLKDKF LNETGSWEGL IICILYEMEV LQERSRWAPY FKVWNKPSDM 120
121 NALIFWDDNE LQLLKPSLVL ERIGKKEAKE MHERIIKSIK QIGGEFSRVA TSFEFDNFAY 180
181 IASIILSYSF DLEMQDSSVN ENEEEETSEE ELENERYLKS MIPLADMLNA DTSKCNANLT 240
241 YDSNCLKMVA LRDIEKNEQV YNIYGEHPNS ELLRRYGYVE W
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| histone methyltransferase activity | 6.20878333364554 | bayes_pls_golite062009 |
| protein methyltransferase activity | 6.08778683840554 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 5.45106430536252 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 5.45106430536252 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 5.45106430536252 | bayes_pls_golite062009 |
| N-methyltransferase activity | 3.98411678860954 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K9 specific) | 3.54138873512018 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.69428385009711 | bayes_pls_golite062009 |
| methyltransferase activity | 2.33114816345072 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 2.25175257044903 | bayes_pls_golite062009 |
| binding | 1.67469558504376 | bayes_pls_golite062009 |
| nucleic acid binding | 1.29511015534184 | bayes_pls_golite062009 |
| protein binding | 1.07532079834012 | bayes_pls_golite062009 |
| transferase activity | 0.653108419761009 | bayes_pls_golite062009 |
| chromatin binding | 0.628375771647179 | bayes_pls_golite062009 |
| catalytic activity | 0.414641636618101 | bayes_pls_golite062009 |
|
Region A: Residues: [282-494] |
1 11 21 31 41 51
| | | | | |
1 DGSKYDFGEV LLENIVEALK ETFETNTEFL DRCIDILRNN ANIQEFLEGE EIVLDSYDCY 60
61 NNGELLPQLI LLVQILTILC QIPGLCKLDI KAMERQVERI VKKCLQLIEG ARATTNCSAT 120
121 WKRCIMKRLA DYPIKKCVSI EKPSKGNSLT REELRDVMAR RVLKSEIDSL QVCEETIDKN 180
181 YKVIPDEKLL TNILKRKLTE EEKSSVKRPC VKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
