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View Structure Prediction Details

Protein: ADR1
Organism: Saccharomyces cerevisiae
Length: 1323 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADR1.

Description E-value Query
Range
Subject
Range
gi|1204157, gi|1... - gi|1204157|emb|CAA92359.1| Adr1p [Saccharomyces cerevisiae], gi|1122349|emb|CAA92367.1| Adr1p [Sacch...
0.0 [1..973] [1..973]
ZNF714 - zinc finger protein 714
0.0 [2..359] [139..502]
ZN252_CANLF - Zinc finger protein 252 OS=Canis lupus familiaris GN=ZNF252 PE=2 SV=1
0.0 [2..419] [422..824]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVEKPNDC SGFPVVDLNS CFSNGFNNEK QEIEMETDDS PILLMSSSAS RENSNTFSVI  60
   61 QRTPDGKIIT TNNNMNSKIN KQLDKLPENL RLNGRTPSGK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.440336
Match: 1a1lA_
Description: ZIF268
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [101-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRSFVCEVCT RAFARQEHLK RHYRSHTNEK PYPCGLCNRC FTRRDLLIRH AQKIHSGNL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 328.741366
Match: 2adr__
Description: ADR1
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [160-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GETISHTKKV SRTITKARKN SASSVKFQTP TYGTPDNGNF LNRTTANTRR KASPEANVKR  60
   61 KYLKKLTRRA SFSAQSASSY ALPDQSSLEQ HPKDRVKFST PELVPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.29073
Match: 1ubdC_
Description: Ying-yang 1 (yy1, zinc finger domain)
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [266-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLKNPELDSS FDLNMNLDLN LNLDSNFNIA LNRSDSSGST MNLDYKLPES ANNYTYSSGS  60
   61 PTRAYVGANT NSKNASFNDA DLLSSSYWIK AYNDHLFSVS ESDETSPMNS ELNDTKLIVP 120
  121 DFKSTIHHLK DSRSSSWTVA IDNNSNNNKV SDNQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [420-822]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDFVDFQELL DNDTLGNDLL ETTAVLKEFE LLHDDSVSAT ATSNEIDLSH LNLSNSPISP  60
   61 HKLIYKNKEG TNDDMLISFG LDHPSNREDD LDKLCNMTRD VQAIFSQYLK GEESKRSLED 120
  121 FLSTSNRKEK PDSGNYTFYG LDCLTLSKIS RALPASTVNN NQPSHSIESK LFNEPMRNMC 180
  181 IKVLRYYEKF SHDSSESVMD SNPNLLSKEL LMPAVSELNE YLDLFKNNFL PHFPIIHPSL 240
  241 LDLDLDSLQR YTNEDGYDDA ENAQLFDRLS QGTDKEYDYE HYQILSISKI VCLPLFMATF 300
  301 GSLHKFGYKS QTIELYEMSR RILHSFLETK RRCRSTTVND SYQNIWLMQS LILSFMFALV 360
  361 ADYLEKIDSS LMKRQLSALC STIRSNCLPT ISANSEKSIN NNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [823-1323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPLTFGSPLQ YIIFESKIRC TLMAYDFCQF LKCFFHIKFD LSIKEKDVET IYIPDNESKW  60
   61 ASESIICNGH VVQKQNFYDF RNFYYSFTYG HLHSIPEFLG SSMIYYEYDL RKGTKSHVFL 120
  121 DRIDTKRLER SLDTSSYGND NMAATNKNIA ILIDDTIILK NNLMSMRFIK QIDRSFTEKV 180
  181 RKGQIAKIYD SFLNSVRLNF LKNYSVEVLC EFLVALNFSI RNISSLYVEE ESDCSQRMNS 240
  241 PELPRIHLNN QALSVFNLQG YYYCFILIIK FLLDFEATPN FKLLRIFIEL RSLANSILLP 300
  301 TLSRLYPQEF SGFPDVVFTQ QFINKDNGML VPGLSANEHH NGASAAVKTK LAKKINVEGL 360
  361 AMFINEILVN SFNDTSFLNM EDPIRNEFSF DNGDRAVTDL PRSAHFLSDT GLEGINFSGL 420
  421 NDSHQTVSTL NLLRYGENHS SKHKNGGKGQ GFAEKYQLSL KYVTIAKLFF TNVKENYIHC 480
  481 HMLDKMASDF HTLENHLKGN S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle