| Protein: | SLY1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 666 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLY1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..666] | [1..666] |
|
|
0.0 | [1..666] | [1..666] |
|
|
0.0 | [6..659] | [2..637] |
|
|
0.0 | [6..659] | [2..639] |
|
|
0.0 | [11..659] | [12..642] |
|
|
0.0 | [12..662] | [2..652] |
|
|
0.0 | [12..662] | [2..634] |
|
|
0.0 | [13..657] | [11..639] |
|
Region A: Residues: [1-160] |
1 11 21 31 41 51
| | | | | |
1 MAVEEIASRK DISLRDMQIS AILKMLFLNK DLNNNDNITT ITDDIFNQQE IIWKVLILDI 60
61 KSTATISSVL RVNDLLKAGI TVHSLIKQDR SPLPDVPAIY FVSPTKENID IIVNDLKSDK 120
121 YSEFYINFTS SLPRNLLEDL AQQVSITGKS DKIKQVYDQY
|
| Detection Method: |  |
| Confidence: | 392.9897 |
| Match: | 1fvfA_ |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 4.56428593085019 | bayes_pls_golite062009 |
| syntaxin binding | 3.46044132736061 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| protein binding | 2.77285532000616 | bayes_pls_golite062009 |
| syntaxin-1 binding | 0.269372794919901 | bayes_pls_golite062009 |
|
Region A: Residues: [161-278] |
1 11 21 31 41 51
| | | | | |
1 LDFIVTEPEL FSLEISNAYL TLNDPKTTEE EITGLCANIA DGLFNTVLTI NSIPIIRAAK 60
61 GGPAEIIAEK LGTKLRDFVI NTNSSSTSTL QGNDSLERGV LIILDRNIDF ASMFSHSW
|
|
Region B: Residues: [562-666] |
1 11 21 31 41 51
| | | | | |
1 VDAIMDPLNS SQKNLETTDS YLYIDPKITR GSHTRKPKRQ SYNKSLVFVV GGGNYLEYQN 60
61 LQEWAHSQLH NPKKVMYGST AITTPAEFLN EISRLGASNS SNNDA
|
| Detection Method: | |
| Confidence: | 392.9897 |
| Match: | 1fvfA_ |
| Description: | Neuronal Sec1, NSec1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [279-412] |
1 11 21 31 41 51
| | | | | |
1 IYQCMVFDIF KLSRNTVTIP LESKENGTDN TTAKPLATKK YDIEPNDFFW MENSHLPFPE 60
61 AAENVEAALN TYKEEAAEIT RKTGVTNISD LDPNSNNDTV QIQEVVKKLP ELTAKKNTID 120
121 THMNIFAALL SQLE
|
| Detection Method: | |
| Confidence: | 392.9897 |
| Match: | 1fvfA_ |
| Description: | Neuronal Sec1, NSec1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [413-561] |
1 11 21 31 41 51
| | | | | |
1 SKSLDTFFEV EQDPGSTKTR SRFLDILKDG KTNNLEDKLR SFIVLYLTST TGLPKDFVQN 60
61 VENYFKENDY DINALKYVYK LREFMQLSNM SLQNKSLEDG SDSAFKPSNL TLSGIYGLTE 120
121 GKLQGGVGSL ISGIKKLLPE KKTIPITNV
|
| Detection Method: | |
| Confidence: | 392.9897 |
| Match: | 1fvfA_ |
| Description: | Neuronal Sec1, NSec1 |
| Matching Structure (courtesy of the PDB): |
|
