| Protein: | CDC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 491 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..491] | [1..491] |
|
|
4.0E-68 | [37..411] | [17..373] |
|
|
6.0E-63 | [49..412] | [7..365] |
|
|
6.0E-63 | [33..423] | [523..903] |
|
|
1.0E-60 | [37..357] | [17..338] |
|
|
3.0E-60 | [38..417] | [66..562] |
|
|
1.0E-55 | [9..343] | [77..384] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MVYRNRSKSV LSTHSKKSDD KAHYKSRSKK KSKSRSKKRL RIYWRYISIV WILWLGLISY 60
61 YESVVVKRAM KKCQWSTWED WPEGAESHRV GLFADPQIMD EYSYP
|
|
Region B: Residues: [147-202] |
1 11 21 31 41 51
| | | | | |
1 DGGRNWDDKQ WIKEYTRFNQ IFPKKPLRRT VMSLPGNHDI GFGDTVVESS LQRFSS
|
| Detection Method: |  |
| Confidence: | 45.154902 |
| Match: | 1kbpA_ |
| Description: | Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [106-146] |
1 11 21 31 41 51
| | | | | |
1 GRPQIVNYFT RVIVDHYHRR NWKYVQYYLD PDSNFFLGDL F
|
|
Region B: Residues: [203-361] |
1 11 21 31 41 51
| | | | | |
1 YFGETSSSLD AGNHTFVLLD TISLSDKTNP NVSRVPRQFL DNFAMGSHPL PRILLTHVPL 60
61 WRDPEQQTCG QLRESKEPFP IQKGHQYQTV IENDISQEIL TKIQPEILFS GDDHDHCQIS 120
121 HSYPFQGKTK NAQEITVKSC AMNMGISRPA IQLLSLYNP
|
| Detection Method: | |
| Confidence: | 45.154902 |
| Match: | 1kbpA_ |
| Description: | Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [362-491] |
1 11 21 31 41 51
| | | | | |
1 SDLTMVNAGG EYASKTYQTE LCYMPDPYKA IRMYLWGLLF SAAFIAYMHF FPKSFNNRVA 60
61 TIMNRVFTRP DGNTSDLPLP TSISKSKSKK SLTHSKYAVN DTRSIKQFLV NAIVLFVSVM 120
121 PIFIYFYTVV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
