| Protein: | SAC3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1301 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAC3.
| Description | E-value | Query Range |
Subject Range |
|
|
1608.0 | [0..189] | [1301..1] |
|
|
910.0 | [0..135] | [1057..52] |
|
|
735.0 | [0..71] | [813..523] |
|
|
719.0 | [0..71] | [813..221] |
|
|
719.0 | [0..71] | [813..400] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MNTSFGSVVP STNFNFFKGH GNNDNTSANS TVNNSNFFLN SNETKPSKNV FMVHSTSQKK 60
61 SQQPLQNLSH SPSYTENKPD KKKKYMINDA KTIQLVGPLI SSPDNLGFQK RSHKARELPR 120
121 FLINQEPQLE KRAFVQDPWD KANQEKMISL EESIDDLNEL YETLKKMRNT ERSIMEEKGL 180
181 VDKADSA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [188-551] |
1 11 21 31 41 51
| | | | | |
1 KDLYDAIVFQ GTCLDMCPTF ERSRRNVEYT VYSYEKNQPN DKKASRTKAL KVFARPAAAA 60
61 APPLPSDVRP PHILVKTLDY IVDNLLTTLP ESEGFLWDRM RSIRQDFTYQ NYSGPEAVDC 120
121 NERIVRIHLL ILHIMVKSNV EFSLQQELEQ LHKSLITLSE IYDDVRSSGG TCPNEAEFRA 180
181 YALLSKIRDP QYDENIQRLP KHIFQDKLVQ MALCFRRVIS NSAYTERGFV KTENCLNFYA 240
241 RFFQLMQSPS LPLLMGFFLQ MHLTDIRFYA LRALSHTLNK KHKPIPFIYL ENMLLFNNRQ 300
301 EIIEFCNYYS IEIINGDAAD LKTLQHYSHK LSETQPLKKT YLTCLERRLQ KTTYKGLING 360
361 GEDN
|
| Detection Method: | |
| Confidence: | 140.017729 |
| Match: | PF03399 |
| Description: | SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [552-609] |
1 11 21 31 41 51
| | | | | |
1 LASSVYVKDP KKDRIPSIAD QSFLMENFQN NYNEKLNQNS SVKPQINTSP KRVATRPN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.414 | a.140.3 | Rho termination factor, N-terminal domain |
| View | Download | 0.382 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.330 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.314 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.299 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.295 | a.4.1 | Homeodomain-like |
| View | Download | 0.291 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.272 | a.140.4 | Recombination endonuclease VII, C-terminal and dimerization domains |
|
Region A: Residues: [610-833] |
1 11 21 31 41 51
| | | | | |
1 HFPFSQESKQ LPQISQSHTL STNPLLTPQV HGDLSEQKQQ QIKTVTDGGS PFVFDQSAQN 60
61 STVEASKAHM ISTTSNGAYD EKLSSEQEEM RKKEEQRIEE EKTQLKKKQE NADKQVITEQ 120
121 IANDLVKEVV NSSVISIVKR EFSEANYRKD FIDTMTRELY DAFLHERLYL IYMDSRAELK 180
181 RNSTLKKKFF EKWQASYSQA KKNRILEEKK REEIKLVSHQ LGVP
|
| Detection Method: | |
| Confidence: | 3.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [834-1301] |
1 11 21 31 41 51
| | | | | |
1 GFKKSTCLFR TPYKGNVNSS FMLSSSDKNL IFSPVNDEFN KFATHLTKIS KLWRPLEMQS 60
61 IYYDNLTKKF PSNSLTPANL FIYAKDWTSL SNRWILSKFN LQTAQDSKKF SNNIISSRII 120
121 CIDDEYEPSD FSDLQLLIFN TGVTNPDIFD LEMKLKDDGE ELIKLITGIS LNTNICFSLL 180
181 IIYWESAENT LSESTIKHLL KLNRISKNYS SVIERIDLMN LTEESPHKCL EDKLSEISHS 240
241 YVYKLTERGK YDKTLRQKRS LAGIHSRSTQ LQTTKDIDQK MKKMLEKEKN KYQQQIGERN 300
301 TYAHLESHID ASPRSKKRKL PILLSTSHSS QFKTPLASRL NTSGSSTSPP LPSHLAMKFR 360
361 KNSRVTSLHT VLPVSTPSHS NNIPAASFSG NNTTDIQSQQ LIENQKSTSV YLNNVSERIL 420
421 GNQEICQTPI NPVTPVLDGA DQGKEDIPDS ILELKILIDS VKKKVNND
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
